RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZFP69BQ9UJL9 534 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 OARD1Q9Y530 152 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 CSAG2Q9Y5P2 127 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 PSAT1Q9Y617 370 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 TRAV17A0A0B4J275 112 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 CFAP73A6NFT4 308 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 SGK494L7N484 410 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 NDUFS4O43181 175 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 SEMA7AO75326 666 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 GSTA2P09210 222 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 SCTRP47872 440 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 SLC12A2P55011 1212 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 TAS2R39P59534 338 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 SNRPNP63162 240 aaKnown RBP12.74□□□□□ -0.37
HMGN1-211ENST00000471260 ARG2P78540 354 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 POU4F1Q01851 419 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 RGS1Q08116 209 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 MFSD4BQ5TF39 518 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 PLAG1Q6DJT9 500 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 ABHD13Q7L211 337 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 FAR1Q8WVX9 515 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 CCT6BQ92526 530 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 NEIL2Q969S2 332 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 CNDP1Q96KN2 507 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 MACROD1Q9BQ69 325 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 AIF1LQ9BQI0 150 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 GPAMQ9HCL2 828 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 PTGFRNQ9P2B2 879 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 NAALAD2Q9Y3Q0 740 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 DYRK1BQ9Y463 629 aa12.74□□□□□ -0.37
HMGN1-211ENST00000471260 USP9XQ93008 2570 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-211ENST00000471260 TLDC2A0PJX2 215 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 WIPF3A6NGB9 483 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 CDK2AP1O14519 115 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 GALR3O60755 368 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-211ENST00000471260 JRKO75564 520 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 STATHP02808 62 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 EDN3P14138 238 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 ALOX12P18054 663 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 SAT1P21673 171 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 TNFSF10P50591 281 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 EFNA3P52797 238 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 PGGT1BP53609 377 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 EXT1Q16394 746 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 CDKL4Q5MAI5 379 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 CATSPEREQ5SY80 951 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 FAM180AQ6UWF9 173 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 THOC6Q86W42 341 aaKnown RBP12.73□□□□□ -0.37
HMGN1-211ENST00000471260 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 PDSS2Q86YH6 399 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 KLHDC8AQ8IYD2 350 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 SIRT6Q8N6T7 355 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 ZNF740Q8NDX6 193 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 OR1N1Q8NGS0 311 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 ZCCHC10Q8TBK6 192 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 GRHL3Q8TE85 626 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 TSPAN17Q96FV3 270 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 DERL2Q9GZP9 239 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 RABEP2Q9H5N1 569 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
HMGN1-211ENST00000471260 NINJ2Q9NZG7 142 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 HCN3Q9P1Z3 774 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 CTNNAL1Q9UBT7 734 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 SLC12A4Q9UP95 1085 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 SLC22A14Q9Y267 594 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 SLC5A6Q9Y289 635 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 POLEQ07864 2286 aa12.73□□□□□ -0.37
HMGN1-211ENST00000471260 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-211ENST00000471260 MAGEB17A8MXT2 336 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 CDC7O00311 574 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 RDH16O75452 317 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 ITGAMP11215 1152 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 GNAZP19086 355 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 JAK1P23458 1154 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 GSTM2P28161 218 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 REEP5Q00765 189 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 MEF2AQ02078 507 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-211ENST00000471260 NSDHLQ15738 373 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 ABHD17BQ5VST6 288 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 H3F3CQ6NXT2 135 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 NXPE4Q6UWF7 544 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 FRA10AC1Q70Z53 315 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 ANKRD37Q7Z713 158 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 EXOC3L1Q86VI1 746 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 BCORP1Q8N888 145 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 CATSPER1Q8NEC5 780 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 TTLQ8NG68 377 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 SUN3Q8TAQ9 357 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 M1APQ8TC57 530 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 DYDC1Q8WWB3 177 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 TBC1D20Q96BZ9 403 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 ZNF354BQ96LW1 612 aa12.72□□□□□ -0.37
HMGN1-211ENST00000471260 CPNE1Q99829 537 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms