RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 SFTPA2Q8IWL1 248 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 EID3Q8N140 333 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 CACTIN-AS1Q8N1I8 211 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 PTGR2Q8N8N7 351 aaPredicted RBP9.62□□□□□ -0.87
PMF1-204ENST00000466489 ZNF555Q8NEP9 628 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 CD200R1Q8TD46 325 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 PHF21BQ96EK2 531 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 ZDHHC12Q96GR4 267 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 NSMCE2Q96MF7 247 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 ADI1Q9BV57 179 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 ALG2Q9H553 416 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 MAGIXQ9H6Y5 334 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 RMND5AQ9H871 391 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 AIG1Q9NVV5 245 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 CHCHD3Q9NX63 227 aaKnown RBP9.62□□□□□ -0.87
PMF1-204ENST00000466489 SLC17A6Q9P2U8 582 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 TDRKHQ9Y2W6 561 aaKnown RBP9.62□□□□□ -0.87
PMF1-204ENST00000466489 DNAJC15Q9Y5T4 150 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 CEPT1Q9Y6K0 416 aa9.62□□□□□ -0.87
PMF1-204ENST00000466489 PCM1Q15154 2024 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 NR5A2O00482 541 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 NTN3O00634 580 aaPredicted RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 CSO75390 466 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 NTRK1P04629 796 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 C8GP07360 202 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ADRB1P08588 477 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 HIST1H2AGP0C0S8 130 aaPredicted RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 CDH1P12830 882 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 JUNBP17275 347 aaPredicted RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 HIST1H2ADP20671 130 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 CYP2A7P20853 494 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ACADLP28330 430 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 HSD17B2P37059 387 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ABCG1P45844 678 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 SERPINB10P48595 397 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 HLCSP50747 726 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ALDH3A2P51648 485 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 PSMD7P51665 324 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 POLR2JP52435 117 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 RAD23AP54725 363 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 GABARAPL2P60520 117 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 SH3BP2P78314 561 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 SP140Q13342 867 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 SQSTM1Q13501 440 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 TRA2AQ13595 282 aaKnown RBP eCLIP9.61□□□□□ -0.87
PMF1-204ENST00000466489 KRR1Q13601 381 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 MOGQ16653 247 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 PFKFB4Q16877 469 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 RBM20Q5T481 1227 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 C10orf62Q5T681 223 aaPredicted RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 BROXQ5VW32 411 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 TMEM198Q66K66 360 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 DUS1LQ6P1R4 473 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 TMEM71Q6P5X7 295 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 USP53Q70EK8 1073 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 TMPRSS7Q7RTY8 843 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 AMIGO1Q86WK6 493 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 SLC15A3Q8IY34 581 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 CPNE9Q8IYJ1 553 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 LILRA2Q8N149 483 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 SETD9Q8NE22 299 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 OR4D9Q8NGE8 314 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 OR5AR1Q8NGP9 310 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 MCOLN3Q8TDD5 553 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 S100ZQ8WXG8 99 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 LRTOMTQ8WZ04 291 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 LINGO1Q96FE5 620 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 HIST1H2AHQ96KK5 128 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 CD180Q99467 661 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 DOK1Q99704 481 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 HIST1H2AJQ99878 128 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 RBM4BQ9BQ04 359 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 H2AFJQ9BTM1 129 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 RBM4Q9BWF3 364 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 GRIP2Q9C0E4 1043 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ING2Q9H160 280 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 OLAHQ9NV23 265 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 HRASLS2Q9NWW9 162 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ASIC5Q9NY37 505 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 IFT80Q9P2H3 777 aaPredicted RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 DNAJB9Q9UBS3 223 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 ZNF639Q9UID6 485 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
PMF1-204ENST00000466489 C3orf18Q9UK00 162 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 AURKCQ9UQB9 309 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 TMED5Q9Y3A6 229 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 GPR45Q9Y5Y3 372 aa9.61□□□□□ -0.87
PMF1-204ENST00000466489 A0A1W2PQM1 296 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 GSAPA4D1B5 854 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 OR5K3A6NET4 321 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 C2orf74A8MZ97 194 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SUPT3HB4E1H0 165 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 FBP2O00757 339 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 SLC16A5O15375 505 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 TOX3O15405 576 aaPredicted RBP9.6□□□□□ -0.87
PMF1-204ENST00000466489 B4GAT1O43505 415 aa9.6□□□□□ -0.87
PMF1-204ENST00000466489 ERN1O75460 977 aaKnown RBP9.6□□□□□ -0.87
PMF1-204ENST00000466489 SUPT3HO75486 399 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms