RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ARL1P40616 181 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CCNG1P51959 295 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SOX8P57073 446 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FHL5Q5TD97 284 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MED27Q6P2C8 311 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GOLGA7Q7Z5G4 137 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 IQCKQ8N0W5 287 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ANKRD53Q8N9V6 530 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 REPS1Q96D71 796 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 IQCGQ9H095 443 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ILKAPQ9H0C8 392 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 RHBGQ9H310 441 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SOX17Q9H6I2 414 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ACTR8Q9H981 624 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CLK4Q9HAZ1 481 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MKKSQ9NPJ1 570 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC22A11Q9NSA0 550 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TRPC4Q9UBN4 977 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 LGALS13Q9UHV8 139 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MAP4K5Q9Y4K4 846 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ASB1Q9Y576 335 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PCDHGA11Q9Y5H2 935 aa12.54□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TNRC6AQ8NDV7 1962 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 A0A088AWK7 358 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CCDC151A5D8V7 595 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 A8MT66 165 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 E2F3O00716 465 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SORBS2O94875 1100 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SIX3O95343 332 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ALOX12P18054 663 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 EPORP19235 508 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 PHEXP78562 749 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC18A2Q05940 514 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TGM3Q08188 693 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 E2F2Q14209 437 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 INPP5JQ15735 1006 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 AGAP7PQ5VUJ5 663 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC6A19Q695T7 634 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MYLK4Q86YV6 388 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 TMEM151AQ8N4L1 468 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 OR9A4Q8NGU2 314 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZCCHC10Q8TBK6 192 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CREB3L4Q8TEY5 395 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MOCOSQ96EN8 888 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FAR2Q96K12 515 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MAGEB10Q96LZ2 347 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 AGAP4Q96P64 663 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 CRB3Q9BUF7 120 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 SLC6A16Q9GZN6 736 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 MID2Q9UJV3 735 aa12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ZNF490Q9ULM2 529 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 ASH1LQ9NR48 2969 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP3-207ENST00000461009 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.4
RAB11FIP3-207ENST00000461009 LRRC14BA6NHZ5 514 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 VSTM2BA6NLU5 285 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PCDH17O14917 1159 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KLHL18O94889 574 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CLDN9O95484 217 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SBK3P0C264 359 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MYL2P10916 166 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PCNAP12004 261 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IL1RNP18510 177 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IMPDH1P20839 514 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IL10P22301 178 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NAA20P61599 178 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HERVK_113P63132 956 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KRT71Q3SY84 523 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TOR1AIP1Q5JTV8 583 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRAMEF9Q5VWM5 478 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 COX15Q7KZN9 410 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MILR1Q7Z6M3 343 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TRABD2AQ86V40 505 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LAS2Q8IYD9 372 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 C4orf33Q8N1A6 199 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AFAP1L2Q8N4X5 818 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RBMXL3Q8N7X1 1067 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CCDC63Q8NA47 563 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RDH11Q8TC12 318 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 UTP15Q8TED0 518 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SPSB2Q99619 263 aa12.52□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NTMT1Q9BV86 223 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms