RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 CHST10O43529 356 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 GLRA3O75311 464 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 SBK3P0C264 359 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 ACPPP15309 386 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 TUBB8Q3ZCM7 444 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 DCAF10Q5QP82 559 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 FAAH2Q6GMR7 532 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 TRIM40Q6P9F5 258 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 KIRREL2Q6UWL6 708 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 LAS2Q8IYD9 372 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 OR7G3Q8NG95 312 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 OR5T3Q8NGG3 340 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 PPP4R1Q8TF05 950 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 METTL21AQ8WXB1 218 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 REPS1Q96D71 796 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 MS4A6EQ96DS6 147 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 SLC25A23Q9BV35 468 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 ATP13A2Q9NQ11 1180 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 FBXL4Q9UKA2 621 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 PCTPQ9UKL6 214 aa20.25■□□□□ 0.83
ABCD4-202ENST00000460308 JRKO75564 520 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 CLDN9O95484 217 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 ATP5F1P24539 256 aaPredicted RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 HNRNPH1P31943 449 aaKnown RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 PLA2G16P53816 162 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 OLR1P78380 273 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 PHEXP78562 749 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 DDX39BQ13838 428 aaKnown RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 CPSF6Q16630 551 aaKnown RBP eCLIP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 ADNP2Q6IQ32 1131 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 CHSY3Q70JA7 882 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 VN1R5Q7Z5H4 357 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 SLC22A9Q8IVM8 553 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 MREGQ8N565 214 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 SRFBP1Q8NEF9 429 aaKnown RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 OR2L5Q8NG80 312 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 ZNF473Q8WTR7 871 aaKnown RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 OR1F2PQ96R84 312 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 COPS7BQ9H9Q2 264 aaPredicted RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 ZNF71Q9NQZ8 489 aaPredicted RBP20.24■□□□□ 0.83
ABCD4-202ENST00000460308 GRID1Q9ULK0 1009 aa20.24■□□□□ 0.83
ABCD4-202ENST00000460308 A0A0G2JN53 185 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 PSMD12O00232 456 aaPredicted RBP20.23■□□□□ 0.83
ABCD4-202ENST00000460308 COPEO14579 308 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 ALOX12BO75342 701 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 KRT4P19013 534 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 JAK1P23458 1154 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 NFATC3Q12968 1075 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 AIMP2Q13155 320 aaKnown RBP20.23■□□□□ 0.83
ABCD4-202ENST00000460308 LACTB2Q53H82 288 aaPredicted RBP20.23■□□□□ 0.83
ABCD4-202ENST00000460308 MILR1Q7Z6M3 343 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 OR11G2Q8NGC1 345 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 TBC1D20Q96BZ9 403 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 C8orf44Q96CB5 159 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 CMTM7Q96FZ5 175 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 F2RL3Q96RI0 385 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 SCN2AQ99250 2005 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 CENPKQ9BS16 269 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 VN1R1Q9GZP7 353 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 AICDAQ9GZX7 198 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 SEMA4BQ9NPR2 832 aaPredicted RBP20.23■□□□□ 0.83
ABCD4-202ENST00000460308 RNF11Q9Y3C5 154 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 ATMQ13315 3056 aa20.23■□□□□ 0.83
ABCD4-202ENST00000460308 H0YIV9 168 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 OR7A17O14581 309 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 B3GALT2O43825 422 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 DLX3O60479 287 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 KLHL41O60662 606 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 SUPT7LO94864 414 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 TGFB1P01137 390 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 FHP07954 510 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 CYC1P08574 325 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 RPS17P08708 135 aaKnown RBP20.22■□□□□ 0.83
ABCD4-202ENST00000460308 C8orf89P0DMQ9 161 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 RNH1P13489 461 aaKnown RBP20.22■□□□□ 0.83
ABCD4-202ENST00000460308 CRHR1P34998 444 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 PIK3CBP42338 1070 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 HERVK_113P63132 956 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 C19orf57Q0VDD7 668 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 ADPRMQ3LIE5 342 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 CCDC153Q494R4 210 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 TMEM35AQ53FP2 167 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 IRAK1BP1Q5VVH5 260 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 TTC19Q6DKK2 380 aaPredicted RBP20.22■□□□□ 0.83
ABCD4-202ENST00000460308 TCTN3Q6NUS6 607 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 SH2D5Q6ZV89 423 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 GALNT16Q8N428 558 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 L3MBTL4Q8NA19 623 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 CCDC63Q8NA47 563 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 OR52B6Q8NGF0 335 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 NSUN5Q96P11 429 aaKnown RBP20.22■□□□□ 0.83
ABCD4-202ENST00000460308 CDK15Q96Q40 435 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 NTMT1Q9BV86 223 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 NPLQ9BXD5 320 aaPredicted RBP20.22■□□□□ 0.83
ABCD4-202ENST00000460308 C1QTNF3Q9BXJ4 246 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 ERVK-6Q9BXR3 956 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 MS4A8Q9BY19 250 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 RBCK1Q9BYM8 510 aa20.22■□□□□ 0.83
ABCD4-202ENST00000460308 C19orf25Q9UFG5 118 aaPredicted RBP20.22■□□□□ 0.83
ABCD4-202ENST00000460308 PLAAQ9Y263 795 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms