RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 OLAHQ9NV23 265 aa9.42□□□□□ -0.9
HDLBP-228ENST00000459788 STMN3Q9NZ72 180 aa9.42□□□□□ -0.9
HDLBP-228ENST00000459788 CSAG2Q9Y5P2 127 aa9.42□□□□□ -0.9
HDLBP-228ENST00000459788 IGKV3D-11A0A0A0MRZ8 115 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 TCRBV16S1A1N1A0A5B0 115 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PSMD12O00232 456 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 FFAR3O14843 346 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 CLGNO14967 610 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 GPR42O15529 346 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PRMT3O60678 531 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 SEMA7AO75326 666 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 JRKO75564 520 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 STK16O75716 305 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 WDR47O94967 919 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 WDPCPO95876 746 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 STSP08842 583 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ZNF888P0CJ79 500 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 CCDC166P0CW27 439 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 CD1DP15813 335 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 SAT1P21673 171 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 MAGEA4P43358 317 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ARFIP1P53367 373 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PLTPP55058 493 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 HSD17B7P56937 341 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 GUCY2DQ02846 1103 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ACTN3Q08043 901 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 HYAL2Q12891 473 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 SFT2D3Q587I9 215 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PAGE2BQ5JRK9 111 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ACER2Q5QJU3 275 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 METTL2BQ6P1Q9 378 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PAPD4Q6PIY7 484 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 LANCL3Q6ZV70 420 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 LRRC70Q7Z2Q7 622 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 RELL1Q8IUW5 271 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 RHEBL1Q8TAI7 183 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 STAG3L4Q8TBR4 150 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ELP5Q8TE02 316 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 NR4A3Q92570 626 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 UBE2E3Q969T4 207 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 MOCOSQ96EN8 888 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PTCD3Q96EY7 689 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PEX11GQ96HA9 241 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 FAR2Q96K12 515 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 TSNARE1Q96NA8 513 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 MACROD1Q9BQ69 325 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 MESP1Q9BRJ9 268 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ROGDIQ9GZN7 287 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 DPH5Q9H2P9 285 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 RHBGQ9H310 441 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 TRIM45Q9H8W5 580 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 KCNK13Q9HB14 408 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 DNAJC11Q9NVH1 559 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PLEKHB1Q9UF11 243 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ADGRE2Q9UHX3 823 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 ERRFI1Q9UJM3 462 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PTBP2Q9UKA9 531 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 IKZF3Q9UKT9 509 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 PPIEQ9UNP9 301 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 MRPS33Q9Y291 106 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 MTO1Q9Y2Z2 717 aaKnown RBP9.41□□□□□ -0.9
HDLBP-228ENST00000459788 TSC22D4Q9Y3Q8 395 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 CRYBG3Q68DQ2 2970 aa9.41□□□□□ -0.9
HDLBP-228ENST00000459788 NCOA6Q14686 2063 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 LRIT2A6NDA9 550 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 ANKDD1BA6NHY2 528 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 CLDN4O14493 209 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SEC24DO94855 1032 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 RASAL1O95294 804 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 S100BP04271 92 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SERPIND1P05546 499 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 TDGF1P3P51864 188 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 OR4D2P58180 307 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SLC26A5P58743 744 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 GPX6P59796 221 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SNRPNP63162 240 aaKnown RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 ZNF33BQ06732 778 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 BIKQ13323 160 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 ZNF460Q14592 562 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 RBBP5Q15291 538 aaKnown RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 PDK4Q16654 411 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 HIST2H2ACQ16777 129 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 HIST2H2AA3Q6FI13 130 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 MTFR2Q6P444 385 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 MAMDC2Q7Z304 686 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 ZNF595Q8IYB9 648 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SLC34A3Q8N130 599 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 TMEM178AQ8NBL3 297 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 CATSPER1Q8NEC5 780 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 OR2L5Q8NG80 312 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 FBXO25Q8TCJ0 367 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 UBTD2Q8WUN7 234 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 RELTQ969Z4 430 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 MS4A6EQ96DS6 147 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 PTCHD1Q96NR3 888 aa9.4□□□□□ -0.9
HDLBP-228ENST00000459788 UTP23Q9BRU9 249 aaKnown RBP9.4□□□□□ -0.9
HDLBP-228ENST00000459788 SPNS1Q9H2V7 528 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms