RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 C20orf96Q9NUD7 363 aaPredicted RBP9.75□□□□□ -0.85
HDLBP-227ENST00000458564 TAS2R13Q9NYV9 303 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 ZFP69BQ9UJL9 534 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 PPIEQ9UNP9 301 aaKnown RBP9.75□□□□□ -0.85
HDLBP-227ENST00000458564 NEU2Q9Y3R4 380 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 INTS1Q8N201 2190 aaKnown RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 A0A1B0GTH9 108 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 OR1F1O43749 312 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 HS6ST1O60243 411 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 B4GALT2O60909 372 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 DNAJB6O75190 326 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 TPOP07202 933 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 ZNF888P0CJ79 500 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 RNH1P13489 461 aaKnown RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 CDC25BP30305 580 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 SCTRP47872 440 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 VPS41P49754 854 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 OLR1P78380 273 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 BTG2P78543 158 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 KCTD19Q17RG1 926 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 HSP90AA5PQ58FG0 334 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 ZNF662Q6ZS27 426 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 SULF2Q8IWU5 870 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 CYP4Z2PQ8N1L4 340 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 MYO1HQ8N1T3 1032 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 C2CD4AQ8NCU7 369 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 B3GNT7Q8NFL0 401 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 UTP15Q8TED0 518 aaKnown RBP9.74□□□□□ -0.85
HDLBP-227ENST00000458564 SNF8Q96H20 258 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 DEFB126Q9BYW3 111 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 SLC6A16Q9GZN6 736 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 KCNN3Q9UGI6 736 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 HRH3Q9Y5N1 445 aa9.74□□□□□ -0.85
HDLBP-227ENST00000458564 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
HDLBP-227ENST00000458564 URADA6NGE7 173 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 PEX1O43933 1283 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 TOXO94900 526 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 B3GALT4O96024 378 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 KRT14P02533 472 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 HIST1H2AGP0C0S8 130 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-227ENST00000458564 SMIM10L1P0DMW3 83 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 HIST1H2ADP20671 130 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 MAOAP21397 527 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 CLCN2P51788 898 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 REEP5Q00765 189 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 HYAL2Q12891 473 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 EMC4Q5J8M3 183 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 TTC27Q6P3X3 843 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 PAQR3Q6TCH7 311 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 GALNT7Q86SF2 657 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 CNTN4Q8IWV2 1026 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 CYP4X1Q8N118 509 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDLBP-227ENST00000458564 ARMC2Q8NEN0 867 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 TRPV3Q8NET8 790 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 ATL1Q8WXF7 558 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 RND1Q92730 232 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 NEIL2Q969S2 332 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 PYCR2Q96C36 320 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 FBXL8Q96CD0 374 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 LINGO1Q96FE5 620 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 POM121Q96HA1 1249 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 SMIM10Q96HG1 83 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 HIST1H2AHQ96KK5 128 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 SIGLEC10Q96LC7 697 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 NDNQ99608 321 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 HIST1H2AJQ99878 128 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 H2AFJQ9BTM1 129 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 SPNS1Q9H2V7 528 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 SLC24A3Q9HC58 644 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 NECTIN3Q9NQS3 549 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 ARL15Q9NXU5 204 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 RNF6Q9Y252 685 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 MMACHCQ9Y4U1 282 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 MAD1L1Q9Y6D9 718 aa9.73□□□□□ -0.85
HDLBP-227ENST00000458564 NAV3Q8IVL0 2385 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ANKHD1Q8IWZ3 2542 aaKnown RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 TRBV11-1A0A0K0K1C0 115 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 FAM221AA4D161 298 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CTAGE15A4D2H0 777 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 SYNDIG1LA6NDD5 238 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 GOLGA8MH3BSY2 632 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 PSMD12O00232 456 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CDC40O60508 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ITGA10O75578 1167 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 TUBB4AP04350 444 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 SERPINA6P08185 405 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 HOXD4P09016 255 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ENO2P09104 434 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 GABRB3P28472 473 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 RFC3P40938 356 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 GPR143P51810 404 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 TERF1P54274 439 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CDKN2DP55273 166 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CSHL1Q14406 222 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CRYMQ14894 314 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CATSPEREQ5SY80 951 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CEP128Q6ZU80 1094 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms