RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CHTF18Q8WVB6 975 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 SLC13A3Q8WWT9 602 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 PIGKQ92643 395 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 UTP4Q969X6 686 aaKnown RBP8.56□□□□□ -1.04
VPS50-207ENST00000458530 APIPQ96GX9 242 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 SH3GL1Q99961 368 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 SARGQ9BW04 601 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 MUC13Q9H3R2 512 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 ERVMER34-1Q9H9K5 563 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 ATAD3AQ9NVI7 634 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 FAM120CQ9NX05 1096 aaKnown RBP8.56□□□□□ -1.04
VPS50-207ENST00000458530 ADA2Q9NZK5 511 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 MCM8Q9UJA3 840 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 ADAM29Q9UKF5 820 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 SH2B3Q9UQQ2 575 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 A0A088AWK7 358 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 GSAPA4D1B5 854 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 URADA6NGE7 173 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 LILRA5A6NI73 299 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 B4DGG1 531 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 LMO7DNF2Z398 122 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 H7BY64 318 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TRIM38O00635 465 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 FBP2O00757 339 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ANKRD28O15084 1053 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 YKT6O15498 198 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 NDUFS4O43181 175 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 SIAH2O43255 324 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 OR1F1O43749 312 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PRICKLE3O43900 615 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 CBFA2T3O75081 653 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 GUCY1B2O75343 617 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 C1QL1O75973 258 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 WNT1P04628 370 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PGRP06401 933 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ANXA4P09525 319 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 COX7A2P14406 83 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ME2P23368 584 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PSMB5P28074 263 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 KIR3DL1P43629 444 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TSFMP43897 325 aaKnown RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 DHPSP49366 369 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 ARRB1P49407 418 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 MTTPP55157 894 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 STXBP1P61764 594 aaKnown RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 CSNK1G2P78368 415 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 RELAQ04206 551 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 RGS1Q08116 209 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 SLC14A1Q13336 389 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PTGR1Q14914 329 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TCEA2Q15560 299 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 SNCBQ16143 134 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 MAPKAPK3Q16644 382 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 SLC5A12Q1EHB4 618 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 FAM174BQ3ZCQ3 159 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ANXA8L1Q5VT79 327 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 KHDRBS2Q5VWX1 349 aaKnown RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 DESI1Q6ICB0 168 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 LYPD8Q6UX82 237 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TMEM26Q6ZUK4 368 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 COMMD6Q7Z4G1 85 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 DHDDSQ86SQ9 333 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 GLRX5Q86SX6 157 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 GPR180Q86V85 440 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 NUDT13Q86X67 352 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ADGRF3Q8IZF5 1079 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 DEFB119Q8N690 84 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 NATD1Q8N6N6 113 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ZNF655Q8N720 491 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 FBXO27Q8NI29 283 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 LMX1AQ8TE12 382 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 SLC37A2Q8TED4 501 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 RGMAQ96B86 450 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 MTERF3Q96E29 417 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 ITCHQ96J02 903 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PRAP1Q96NZ9 151 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 OR52E6Q96RD3 313 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 DPH7Q9BTV6 452 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 MS4A8Q9BY19 250 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TRIM15Q9C019 465 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 TCEAL2Q9H3H9 227 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 CCDC86Q9H6F5 360 aaKnown RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 MYNNQ9NPC7 610 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 CUEDC1Q9NWM3 386 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 ACTR10Q9NZ32 417 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 SUCOQ9UBS9 1254 aaKnown RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 KLF15Q9UIH9 416 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PNMA8BQ9ULN7 279 aaPredicted RBP8.55□□□□□ -1.04
VPS50-207ENST00000458530 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 L3MBTL1Q9Y468 752 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 CSNK1G3Q9Y6M4 447 aa8.55□□□□□ -1.04
VPS50-207ENST00000458530 PTPRQQ9UMZ3 2332 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 HECTD1Q9ULT8 2610 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 A0A087WV48 116 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 A0A0J9YY10 115 aa8.54□□□□□ -1.04
VPS50-207ENST00000458530 OR6C74A6NCV1 312 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms