RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CIR1Q86X95 450 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 HIPK1Q86Z02 1210 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC30A8Q8IWU4 369 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RGL4Q8IZJ4 473 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TCTE3Q8IZS6 198 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CRYBG2Q8N1P7 616 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM181AQ8N9Y4 354 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 AGBL3Q8NEM8 1001 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 OR8H1Q8NGG4 311 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 LKAAEAR1Q8TD35 194 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ARSGQ96EG1 525 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 HEBP1Q9NRV9 189 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ADAMTS5Q9UNA0 930 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PCDHGB2Q9Y5G2 931 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CENPEQ02224 2701 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 E9PAM4 449 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ARNTLO00327 626 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 QSOX1O00391 747 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 HPGDSO60760 199 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 NME6O75414 186 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 WDR47O94967 919 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ETHE1O95571 254 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 F12P00748 615 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 POMCP01189 267 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SRP9P49458 86 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 HMGCS2P54868 508 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR85P60893 370 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ERVK-8P63133 956 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CRYZQ08257 329 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CACNB2Q08289 660 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 LCP2Q13094 533 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MED22Q15528 200 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 AANATQ16613 207 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 WDR78Q5VTH9 848 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 AGAP9Q5VTM2 703 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ARHGEF16Q5VV41 709 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 LIPKQ5VXJ0 399 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 KIAA0930Q6ICG6 404 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PDE12Q6L8Q7 609 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TIGD7Q6NT04 549 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC27A1Q6PCB7 646 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM88Q6PEY1 159 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 IL20RBQ6UXL0 311 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RBMS3Q6XE24 437 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PLEKHM3Q6ZWE6 761 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 METTL3Q86U44 580 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MS4A15Q8N5U1 240 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TERB1Q8NA31 727 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GALNT6Q8NCL4 622 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 OR4F6Q8NGB9 312 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 OR2T4Q8NH00 348 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ACAT2Q9BWD1 397 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TKTL2Q9H0I9 626 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZMAT5Q9UDW3 170 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TRHDEQ9UKU6 1024 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MRPS7Q9Y2R9 242 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CDH10Q9Y6N8 788 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 A3GALT2U3KPV4 340 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TTC28Q96AY4 2481 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RRN3P2A6NIE6 340 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PTGESO14684 152 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PSIP1O75475 530 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 F9P00740 461 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SERPINF2P08697 491 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SELLP14151 372 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CD22P20273 847 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 NUDT1P36639 197 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ERVK-21P61565 698 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GALEQ14376 348 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CLVS2Q5SYC1 327 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PIK3R6Q5UE93 754 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RAET1GQ6H3X3 334 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF770Q6IQ21 691 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 KIAA1211LQ6NV74 962 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF544Q6NX49 715 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM107Q6UX40 140 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SHFQ7M4L6 423 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 TAC4Q86UU9 113 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 LINC01465Q8N7H1 131 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MINDY2Q8NBR6 621 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 STK35Q8TDR2 534 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZFPM2Q8WW38 1151 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 WNT8BQ93098 351 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 MARVELD3Q96A59 401 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CCDC115Q96NT0 180 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR21Q99679 349 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 DPH7Q9BTV6 452 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PRR14Q9BWN1 585 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 RNF32Q9H0A6 362 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 KCTD5Q9NXV2 234 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 CD274Q9NZQ7 290 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 PDP1Q9P0J1 537 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF70Q9UC06 446 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SRRDQ9UH36 339 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 COPS3Q9UNS2 423 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 SONP18583 2426 aaKnown RBP4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 ELOVL7A1L3X0 281 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 GLUD1P00367 558 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 NTRK1P04629 796 aa4.36□□□□□ -1.71
DEPDC1-202ENST00000456315 LPLP06858 475 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms