RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SLC2A4RGQ9NR83 387 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 HEBP1Q9NRV9 189 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 IARS2Q9NSE4 1012 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 NLE1Q9NVX2 485 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM30AQ9NZY2 134 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 IL17CQ9P0M4 197 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC17A6Q9P2U8 582 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 PEMTQ9UBM1 199 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 FBXL17Q9UF56 701 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 IL36AQ9UHA7 158 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 STEAP1Q9UHE8 339 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 FBXO5Q9UKT4 447 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 NDRG4Q9ULP0 352 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 LIPT1Q9Y234 373 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 STON1Q9Y6Q2 735 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CAPN7Q9Y6W3 813 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 WDR87Q6ZQQ6 2873 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SCN8AQ9UQD0 1980 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 A0A0C4DFX4 3053 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 LOC100509620A0A075B734 347 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 C1orf232A0A0U1RR37 186 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 IQANK1A0A1B0GTG1 560 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 A0A1W2PRV1 198 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 OR51F1A6NGY5 319 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 A6NL46 340 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SHISA7A6NL88 538 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 A8MX80 341 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 CDRT15L2A8MXV6 281 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TRIM49D1C9J1S8 452 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 KPNA3O00505 521 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 NKX2-8O15522 239 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 NARSO43776 548 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 PAGE4O60829 102 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TRIM13O60858 407 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 NOL3O60936 208 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 CLDN7O95471 211 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 GOT2P00505 430 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 EGFP01133 1207 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TMEM225BP0DP42 221 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 NR1D1P20393 614 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 AVPR2P30518 371 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SPRP35270 261 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 HMGCLP35914 325 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 LEPRP48357 1165 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SUOXP51687 545 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 CAPZA1P52907 286 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 YBX1P67809 324 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 XIAPP98170 497 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SEMG2Q02383 582 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 GRSF1Q12849 480 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 DNAJC3Q13217 504 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 ELAVL3Q14576 367 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 PON2Q15165 354 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 UGP2Q16851 508 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SPDYAQ5MJ70 313 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZNF470Q6ECI4 717 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 RGS7BPQ6MZT1 257 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 KIAA1324Q6UXG2 1013 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TIFABQ6ZNK6 161 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 MICALCLQ6ZW33 695 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 LARP4Q71RC2 724 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 GLT6D1Q7Z4J2 308 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 PTAR1Q7Z6K3 402 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 DSG4Q86SJ6 1040 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TSPAN33Q86UF1 283 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZC3HC1Q86WB0 502 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 DENND6AQ8IWF6 608 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SRRM1Q8IYB3 904 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 MINDY1Q8N5J2 469 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 PNPLA1Q8N8W4 532 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 OR4L1Q8NH43 312 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 FAM76AQ8TAV0 307 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 RAB40AQ8WXH6 277 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 OR8D1Q8WZ84 308 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 NPIPB3Q92617 1050 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TFAP2CQ92754 450 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 MTBPQ96DY7 904 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 LIN37Q96GY3 246 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SERAC1Q96JX3 654 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SYT3Q9BQG1 590 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SRSF8Q9BRL6 282 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 LIN28AQ9H9Z2 209 aaKnown RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 BPIFA1Q9NP55 256 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 IL26Q9NPH9 171 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SIRT3Q9NTG7 399 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 C19orf73Q9NVV2 129 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SENP1Q9P0U3 644 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 SH3BP4Q9P0V3 963 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 KLHL14Q9P2G3 628 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 TXNDC16Q9P2K2 825 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 OSGIN1Q9UJX0 560 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZDBF2Q9HCK1 2354 aa5.02□□□□□ -1.61
HMGB1P4-201ENST00000455362 PLXNB3Q9ULL4 1909 aa5.01□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZNF106Q9H2Y7 1883 aaKnown RBP5.01□□□□□ -1.61
HMGB1P4-201ENST00000455362 RNF103-CHMP3A0A140T963 221 aa5.01□□□□□ -1.61
HMGB1P4-201ENST00000455362 A0A1W2PQF6 199 aa5.01□□□□□ -1.61
HMGB1P4-201ENST00000455362 TCRBV21S2A2A0A5A6 115 aa5.01□□□□□ -1.61
HMGB1P4-201ENST00000455362 OR6C76A6NM76 312 aa5.01□□□□□ -1.61
HMGB1P4-201ENST00000455362 GOLGA8RI6L899 631 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms