RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 EFCAB11Q9BUY7 163 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 PRDM9Q9NQV7 894 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 DNAJC11Q9NVH1 559 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 CD274Q9NZQ7 290 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 COPG2Q9UBF2 871 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ERRFI1Q9UJM3 462 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 IKZF3Q9UKT9 509 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 MTO1Q9Y2Z2 717 aaKnown RBP16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 MMACHCQ9Y4U1 282 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 POLEQ07864 2286 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ICE1Q9Y2F5 2266 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZGRF1Q86YA3 2104 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 IGHV3-20A0A0C4DH32 117 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 CLEC3AO75596 197 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 CDC123O75794 336 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 CD46P15529 392 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 CRABP2P29373 138 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 MAGEA4P43358 317 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 RBPJQ06330 500 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 C2orf54Q08AI8 447 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 TOR1AIP1Q5JTV8 583 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 SLCO4C1Q6ZQN7 724 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 RAPH1Q70E73 1250 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 MAMDC2Q7Z304 686 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZNF572Q7Z3I7 529 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 TBC1D1Q86TI0 1168 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 CCDC25Q86WR0 208 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 ANKRD53Q8N9V6 530 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 TMEM178AQ8NBL3 297 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 SRFBP1Q8NEF9 429 aaKnown RBP16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 OR5T3Q8NGG3 340 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 CCT6BQ92526 530 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 UBE2E3Q969T4 207 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 KIAA1191Q96A73 305 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 PTCD3Q96EY7 689 aaKnown RBP16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 ROGDIQ9GZN7 287 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 TSPYL1Q9H0U9 437 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 NMRAL1Q9HBL8 299 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 GRHL1Q9NZI5 618 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 RNF112Q9ULX5 631 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 SVILO95425 2214 aa16.06■□□□□ 0.16
TNFRSF4-202ENST00000453580 NCF1BA6NI72 391 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 NCF1CA8MVU1 366 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 B4GALT2O60909 372 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 WISP3O95389 354 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 CELA2AP08217 269 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SMIM10L1P0DMW3 83 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 NCF1P14598 390 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 CD1DP15813 335 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SLC26A5P58743 744 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 RAB8AP61006 207 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SLBPQ14493 270 aaKnown RBP eCLIP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 TERF2Q15554 542 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZKSCAN8Q15776 578 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 PDK4Q16654 411 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZNF766Q5HY98 468 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 MTFR2Q6P444 385 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 TRIM40Q6P9F5 258 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SYT10Q6XYQ8 523 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 PDPRQ8NCN5 879 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 CREB3L4Q8TEY5 395 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SMIM10Q96HG1 83 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 UBXN10Q96LJ8 280 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SPNS1Q9H2V7 528 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 SMYD2Q9NRG4 433 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 OSGIN2Q9Y236 505 aa16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 PRRC2CQ9Y520 2896 aaKnown RBP16.05■□□□□ 0.16
TNFRSF4-202ENST00000453580 NAV2Q8IVL1 2488 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 E2F3O00716 465 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 FANCGO15287 622 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 PHGDHO43175 533 aaKnown RBP16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 B3GALT2O43825 422 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 STSP08842 583 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 SERPINB1P30740 379 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 PHBP35232 272 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 HNF4AP41235 474 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 EFNA3P52797 238 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 HSD17B7P56937 341 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 SNRPNP63162 240 aaKnown RBP16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 KBTBD12Q3ZCT8 623 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 XKR6Q5GH73 641 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZNF324BQ6AW86 544 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 RPS19BP1Q86WX3 136 aaKnown RBP16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 CYP4X1Q8N118 509 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 BEST3Q8N1M1 668 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 PPM1NQ8N819 430 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 SNX31Q8N9S9 440 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 OR2L5Q8NG80 312 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 FBXO25Q8TCJ0 367 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 RBCK1Q9BYM8 510 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 COPS7BQ9H9Q2 264 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 CAB39LQ9H9S4 337 aa16.04■□□□□ 0.16
TNFRSF4-202ENST00000453580 RELNP78509 3460 aa16.03■□□□□ 0.16
TNFRSF4-202ENST00000453580 TCRBV16S1A1N1A0A5B0 115 aa16.03■□□□□ 0.16
TNFRSF4-202ENST00000453580 LRIT2A6NDA9 550 aa16.03■□□□□ 0.16
TNFRSF4-202ENST00000453580 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
TNFRSF4-202ENST00000453580 SYCE1LA8MT33 242 aa16.03■□□□□ 0.16
TNFRSF4-202ENST00000453580 CXorf49A8MYA2 514 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms