RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 ADGRF3Q8IZF5 1079 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 CLEC4FQ8N1N0 589 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 SYNPOQ8N3V7 929 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 TTLQ8NG68 377 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 MAGEE2Q8TD90 523 aaPredicted RBP16.97■□□□□ 0.31
CTSB-204ENST00000453527 CREB3L4Q8TEY5 395 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 RGMAQ96B86 450 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 DPH2Q9BQC3 489 aaPredicted RBP16.97■□□□□ 0.31
CTSB-204ENST00000453527 PHF7Q9BWX1 381 aaPredicted RBP16.97■□□□□ 0.31
CTSB-204ENST00000453527 SLC6A16Q9GZN6 736 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 LHX9Q9NQ69 397 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 TMEM184CQ9NVA4 438 aa16.97■□□□□ 0.31
CTSB-204ENST00000453527 PNMA8BQ9ULN7 279 aaPredicted RBP16.97■□□□□ 0.31
CTSB-204ENST00000453527 NTRK1P04629 796 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 LINGO3P0C6S8 592 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 NDUFS1P28331 727 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 KDELR2P33947 212 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 MERTKQ12866 999 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 C16orf72Q14CZ0 275 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 TBPL2Q6SJ96 375 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 TRIML2Q8N7C3 387 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 FLCNQ8NFG4 579 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 OR2L3Q8NG85 312 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 CCL4L1Q8NHW4 92 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 TM4SF18Q96CE8 201 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 ADI1Q9BV57 179 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 TMEM168Q9H0V1 697 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 ZNF696Q9H7X3 374 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 SLC6A20Q9NP91 592 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 SMPD3Q9NY59 655 aaPredicted RBP16.96■□□□□ 0.31
CTSB-204ENST00000453527 SPHK1Q9NYA1 384 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 NDRG2Q9UN36 371 aaKnown RBP16.96■□□□□ 0.31
CTSB-204ENST00000453527 HS3ST3A1Q9Y663 406 aa16.96■□□□□ 0.31
CTSB-204ENST00000453527 SNRNP200O75643 2136 aaKnown RBP16.96■□□□□ 0.31
CTSB-204ENST00000453527 TMEM265A0A087WTH1 108 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 NDUFS4O43181 175 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 DDCP20711 480 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 PEBP1P30086 187 aaKnown RBP16.96■□□□□ 0.3
CTSB-204ENST00000453527 SHMT2P34897 504 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 GRK3P35626 688 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 UBE3DQ7Z6J8 389 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 NUDT13Q86X67 352 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 FAM20CQ8IXL6 584 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 MMP21Q8N119 569 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 TMEM145Q8NBT3 493 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 POLMQ9NP87 494 aaPredicted RBP16.96■□□□□ 0.3
CTSB-204ENST00000453527 SLC2A4RGQ9NR83 387 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 TAS2R9Q9NYW1 312 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 OR6C2Q9NZP2 312 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 TAAR2Q9P1P5 351 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 ZNF624Q9P2J8 865 aaPredicted RBP16.96■□□□□ 0.3
CTSB-204ENST00000453527 ADAM29Q9UKF5 820 aa16.96■□□□□ 0.3
CTSB-204ENST00000453527 A0A1W2PRB8 838 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 LRIT2A6NDA9 550 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 TBX19O60806 448 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 IGLV3-19P01714 112 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 NUDT7P0C024 238 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 SRFP11831 508 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 GSTM5P46439 218 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 MVDP53602 400 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 SRP54P61011 504 aaKnown RBP16.95■□□□□ 0.3
CTSB-204ENST00000453527 HEPACAMQ14CZ8 416 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 TCEA2Q15560 299 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 LRIT3Q3SXY7 679 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 SLC36A3Q495N2 470 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 LRRC23Q53EV4 343 aaPredicted RBP16.95■□□□□ 0.3
CTSB-204ENST00000453527 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTSB-204ENST00000453527 IYDQ6PHW0 289 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 Q6ZSR6 202 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 AMIGO1Q86WK6 493 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTSB-204ENST00000453527 NAGSQ8N159 534 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 FAM47BQ8NA70 645 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 LCN9Q8WX39 176 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 SLC35A5Q9BS91 424 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 DDX31Q9H8H2 851 aaKnown RBP16.95■□□□□ 0.3
CTSB-204ENST00000453527 GPATCH2Q9NW75 528 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 RPS6KA6Q9UK32 745 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 LRP4O75096 1905 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 TRIOO75962 3097 aa16.95■□□□□ 0.3
CTSB-204ENST00000453527 FANCMQ8IYD8 2048 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 G3V2T6 193 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 RASGRP1O95267 797 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ZNF682O95780 498 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 BCL6P41182 706 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ACTR1BP42025 376 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 MAGEA2P43356 314 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ARSFP54793 590 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ACTR1AP61163 376 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 VAC14Q08AM6 782 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ALG11Q2TAA5 492 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTSB-204ENST00000453527 OTUD3Q5T2D3 398 aaPredicted RBP16.94■□□□□ 0.3
CTSB-204ENST00000453527 SLC30A9Q6PML9 568 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ZNF852Q6ZMS4 543 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 Q6ZS52 159 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ZDHHC13Q8IUH4 622 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
CTSB-204ENST00000453527 ZCCHC7Q8N3Z6 543 aaKnown RBP16.94■□□□□ 0.3
CTSB-204ENST00000453527 FBXL6Q8N531 539 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms