RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 S1PR4O95977 384 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 APOC1P02654 83 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 SLC2A2P11168 524 aaPredicted RBP18.49■□□□□ 0.55
HMGA1-205ENST00000447654 G6PDP11413 515 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 PIPP12273 146 aaPredicted RBP18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ADRA1BP35368 520 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 TP53BP2Q13625 1128 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ELOAQ14241 798 aaKnown RBP18.49■□□□□ 0.55
HMGA1-205ENST00000447654 MED22Q15528 200 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 FLYWCH1Q4VC44 716 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 TIGD5Q53EQ6 642 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ERICH5Q6P6B1 374 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 LUZP2Q86TE4 346 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 NPWQ8N729 165 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 CLRN3Q8NCR9 226 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 IPMKQ8NFU5 416 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 CLHC1Q8NHS4 586 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 KCTD13Q8WZ19 329 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 KCNJ15Q99712 375 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ANKRA2Q9H9E1 313 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 GLOD4Q9HC38 313 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 GALNT9Q9HCQ5 603 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 RGS18Q9NS28 235 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 SLC25A37Q9NYZ2 338 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 CDH10Q9Y6N8 788 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 M0QZ92 97 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 KLK8O60259 260 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ADAMTS4O75173 837 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ANXA3P12429 323 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 CRISP3P54108 245 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 TTLL9Q3SXZ7 439 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 TIGD4Q8IY51 512 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 OR8K3Q8NH51 312 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 YIPF5Q969M3 257 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ZBED6CLQ96FA7 236 aaPredicted RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 SLC2A13Q96QE2 648 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 RBP7Q96R05 134 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 FAM129BQ96TA1 746 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 REG4Q9BYZ8 158 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 MED28Q9H204 178 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 THUMPD1Q9NXG2 353 aaKnown RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 NLKQ9UBE8 527 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 NCKAP1Q9Y2A7 1128 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 A0A1B0GTL3 188 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 A0A1W2PQL4 384 aaPredicted RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 F8W036 122 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ALDH1A1P00352 501 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 POMCP01189 267 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ASGR1P07306 291 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 USP17L7P0C7H9 530 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 CKMT1AP12532 417 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 C4BPBP20851 252 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 CCND3P30281 292 aaPredicted RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 EPHA5P54756 1037 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 PRKCZQ05513 592 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 CACNB2Q08289 660 aaPredicted RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 LAPTM4AQ15012 233 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 UPP1Q16831 310 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 KLHL22Q53GT1 634 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ZNF628Q5EBL2 1059 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 CD300LGQ6UXG3 332 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 RANBP10Q6VN20 620 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 MAMSTRQ6ZN01 415 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 GPRIN3Q6ZVF9 776 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 CDH26Q8IXH8 852 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 HASPINQ8TF76 798 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 MYLPFQ96A32 169 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 OR5M11Q96RB7 305 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ZNF382Q96SR6 550 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 MED18Q9BUE0 208 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ARNT2Q9HBZ2 717 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 HHATLQ9HCP6 504 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 EXOSC4Q9NPD3 245 aaKnown RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 FNIP2Q9P278 1114 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 OGDHLQ9ULD0 1010 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 PADI3Q9ULW8 664 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 NDRG2Q9UN36 371 aaKnown RBP18.48■□□□□ 0.55
HMGA1-205ENST00000447654 ASB4Q9Y574 426 aa18.48■□□□□ 0.55
HMGA1-205ENST00000447654 A0A1B0GVI7 797 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 HHLA1C9JL84 531 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 E9PAM4 449 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 MPZL2O60487 215 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 VIPP01282 170 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 THPOP40225 353 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 CRYBB2P43320 205 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 PPP3R1P63098 170 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 RPA4Q13156 261 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 MAD2L1Q13257 205 aaPredicted RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 FGFBP1Q14512 234 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 LRFN4Q6PJG9 635 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 DBX2Q6ZNG2 339 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 GCNT7Q6ZNI0 430 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 BHLHA9Q7RTU4 235 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 ADGRD2Q7Z7M1 963 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 SLC9A6Q92581 669 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 ATOH1Q92858 354 aaPredicted RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 UCN3Q969E3 161 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 CPPED1Q9BRF8 314 aaPredicted RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 DPCDQ9BVM2 203 aaPredicted RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 DERL2Q9GZP9 239 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms