RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 SRFBP1Q8NEF9 429 aaKnown RBP15.5■□□□□ 0.07
SF3A1-204ENST00000447376 TM9SF4Q92544 642 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 ATP6V1E2Q96A05 226 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 GAL3ST3Q96A11 431 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 REPS1Q96D71 796 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 CCDC126Q96EE4 140 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 PHF21BQ96EK2 531 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 MOCOSQ96EN8 888 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 OR1F2PQ96R84 312 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 SMC6Q96SB8 1091 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 CENPKQ9BS16 269 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 SLC6A16Q9GZN6 736 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 ACTR8Q9H981 624 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 ADGRE2Q9UHX3 823 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 HS3ST3B1Q9Y662 390 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 PIEZO2Q9H5I5 2752 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 NSG1A0A0A6YYJ2 146 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 GOLGA6L10A6NI86 522 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 SOCS6O14544 535 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 GALR3O60755 368 aaPredicted RBP15.49■□□□□ 0.07
SF3A1-204ENST00000447376 BMP10O95393 424 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 PCNAP12004 261 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 CASP2P42575 452 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 RAB8AP61006 207 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 SLC18A2Q05940 514 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 KLRB1Q12918 225 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 FAAH2Q6GMR7 532 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 MED27Q6P2C8 311 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 SH2D5Q6ZV89 423 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 TRABD2AQ86V40 505 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 SLC22A9Q8IVM8 553 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 ZC3H7AQ8IWR0 971 aaKnown RBP15.49■□□□□ 0.07
SF3A1-204ENST00000447376 SRRM1Q8IYB3 904 aaKnown RBP15.49■□□□□ 0.07
SF3A1-204ENST00000447376 UTP15Q8TED0 518 aaKnown RBP15.49■□□□□ 0.07
SF3A1-204ENST00000447376 WDR34Q96EX3 536 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 ZIM3Q96PE6 472 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 ROGDIQ9GZN7 287 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 STMN4Q9H169 189 aaPredicted RBP15.49■□□□□ 0.07
SF3A1-204ENST00000447376 CENPHQ9H3R5 247 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 COPG2Q9UBF2 871 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 MID2Q9UJV3 735 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 ANAPC2Q9UJX6 822 aa15.49■□□□□ 0.07
SF3A1-204ENST00000447376 ZNF860A6NHJ4 632 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 ERI3O43414 337 aaKnown RBP15.48■□□□□ 0.07
SF3A1-204ENST00000447376 DPM1O60762 260 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 ALOX12BO75342 701 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 C1QL1O75973 258 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 HPP00738 406 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 C8orf89P0DMQ9 161 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 ATP5F1P24539 256 aaPredicted RBP15.48■□□□□ 0.07
SF3A1-204ENST00000447376 EEF1DP29692 281 aaKnown RBP15.48■□□□□ 0.07
SF3A1-204ENST00000447376 GTF2H2Q13888 395 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 RCN2Q14257 317 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 VWA5B1Q5TIE3 1220 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 LIPJQ5W064 366 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 GRHL2Q6ISB3 625 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 GTF2H2CQ6P1K8 395 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 KIRREL2Q6UWL6 708 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 ATG14Q6ZNE5 492 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 CHSY3Q70JA7 882 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 NDUFAF7Q7L592 441 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 PTRH1Q86Y79 214 aaKnown RBP15.48■□□□□ 0.07
SF3A1-204ENST00000447376 C4orf33Q8N1A6 199 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 AFAP1L2Q8N4X5 818 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 CCDC63Q8NA47 563 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 OR11G2Q8NGC1 345 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 RDH11Q8TC12 318 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 CREB3L4Q8TEY5 395 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 PEX11GQ96HA9 241 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 APOPT1Q96IL0 206 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 REXO4Q9GZR2 422 aaKnown RBP15.48■□□□□ 0.07
SF3A1-204ENST00000447376 RIC8BQ9NVN3 520 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 PCDHGA11Q9Y5H2 935 aa15.48■□□□□ 0.07
SF3A1-204ENST00000447376 FOXO6A8MYZ6 492 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 SLC28A2O43868 658 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 UGDHO60701 494 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 CEACAM4O75871 244 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 MYL2P10916 166 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 RNH1P13489 461 aaKnown RBP15.47■□□□□ 0.07
SF3A1-204ENST00000447376 ICAM2P13598 275 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 CCNG1P51959 295 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 BTN3A2P78410 334 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 RAPSNQ13702 412 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 MYBPC3Q14896 1274 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 GOLGA7Q7Z5G4 137 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 LAPTM4BQ86VI4 370 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 PDSS2Q86YH6 399 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 TMEM151AQ8N4L1 468 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 ARMC2Q8NEN0 867 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 FDCSPQ8NFU4 85 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 OR2L5Q8NG80 312 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 ADAMTS18Q8TE60 1221 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 PPP4R1Q8TF05 950 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 TBC1D20Q96BZ9 403 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 MAGEB10Q96LZ2 347 aaPredicted RBP15.47■□□□□ 0.07
SF3A1-204ENST00000447376 LHPPQ9H008 270 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 RHBGQ9H310 441 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 IPPKQ9H8X2 491 aa15.47■□□□□ 0.07
SF3A1-204ENST00000447376 MKS1Q9NXB0 559 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms