RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RABEP2Q9H5N1 569 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 WDR55Q9H6Y2 383 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 MEAF6Q9HAF1 191 aa17.09■□□□□ 0.33
TRAPPC4-203ENST00000447216 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 URADA6NGE7 173 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZNF860A6NHJ4 632 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 FOXS1O43638 330 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 PEX11AO75192 247 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 KIAA0754O94854 1291 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 ALOX12P18054 663 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 ALAS2P22557 587 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 HK2P52789 917 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 BTN3A2P78410 334 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 TBL3Q12788 808 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 NDUFA9Q16795 377 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 MUM1Q2TAK8 710 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 GALNTL6Q49A17 601 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 DEFB134Q4QY38 66 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 TRIM40Q6P9F5 258 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZNF793Q6ZN11 406 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 ABHD13Q7L211 337 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 PDSS2Q86YH6 399 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 C1orf52Q8N6N3 182 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 OR9A4Q8NGU2 314 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 TUBGCP3Q96CW5 907 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 QRFPRQ96P65 431 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 CENPKQ9BS16 269 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 DDA1Q9BW61 102 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 FAM107BQ9H098 131 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 LHX9Q9NQ69 397 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 TXLNGQ9NUQ3 528 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 FOXJ2Q9P0K8 574 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 DCTN4Q9UJW0 460 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 PCDHB3Q9Y5E6 796 aa17.08■□□□□ 0.32
TRAPPC4-203ENST00000447216 AHCTF1Q8WYP5 2266 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 TRPC5OSA6NMA1 111 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 SGK494L7N484 410 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 DSCR3O14972 297 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 LSM1O15116 133 aaKnown RBP17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 DIAPH2O60879 1101 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 DNAJB6O75190 326 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 EEDO75530 441 aaKnown RBP17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 KLHL18O94889 574 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 GBAP04062 536 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 ALOX15P16050 662 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 DRD4P21917 467 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 CERS1P27544 350 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 EPHA3P29320 983 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 BSGP35613 385 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 SSR2P43308 183 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 ARSFP54793 590 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 EMP3P54852 163 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 AQP5P55064 265 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 TGM3Q08188 693 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 CAMK2BQ13554 666 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 FAM214AQ32MH5 1076 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 OR4C11Q6IEV9 310 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 COMMD6Q7Z4G1 85 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 METTL4Q8N3J2 472 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 CHTF18Q8WVB6 975 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 CLIP3Q96DZ5 547 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 TEFMQ96QE5 360 aaKnown RBP17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 EBF4Q9BQW3 602 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZNF717Q9BY31 904 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 TRIM55Q9BYV6 548 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 ULBP3Q9BZM4 244 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 AKTIPQ9H8T0 292 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 LRTM1Q9HBL6 345 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 ANKHQ9HCJ1 492 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 PFDN4Q9NQP4 134 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 PRDM7Q9NQW5 492 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 RIC8BQ9NVN3 520 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 NMRK1Q9NWW6 199 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 SRPK3Q9UPE1 567 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 NAALAD2Q9Y3Q0 740 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 PCDHGA8Q9Y5G5 932 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 SLC22A7Q9Y694 548 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 MAU2Q9Y6X3 613 aa17.07■□□□□ 0.32
TRAPPC4-203ENST00000447216 TEX51A0A1B0GUA7 166 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 GALR3O60755 368 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 CPNE3O75131 537 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 SEC22BO75396 215 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 RDH16O75452 317 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 RSL1D1O76021 490 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 SEMA3DO95025 777 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 TGDSO95455 350 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 TROVE2P10155 538 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 ATP5A1P25705 553 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 OR1D4P47884 311 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 IDH3AP50213 366 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 RPL38P63173 70 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 OLR1P78380 273 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 RAE1P78406 368 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 ACSM2AQ08AH3 577 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms