RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 TTC19Q6DKK2 380 aaPredicted RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 NIPAL1Q6NVV3 410 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 SHISA6Q6ZSJ9 500 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 CHSY3Q70JA7 882 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 C10orf107Q8IVU9 208 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 PRSS58Q8IYP2 241 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 RNF175Q8N4F7 328 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 OR51Q1Q8NH59 317 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 STT3BQ8TCJ2 826 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 MIEF2Q96C03 454 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 MTFMTQ96DP5 389 aaKnown RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 CMTM7Q96FZ5 175 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 SMIM10Q96HG1 83 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 FAR2Q96K12 515 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 MAGEB10Q96LZ2 347 aaPredicted RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 MTERF1Q99551 399 aaKnown RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 REXO4Q9GZR2 422 aaKnown RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 STMN4Q9H169 189 aaPredicted RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 SOX17Q9H6I2 414 aaPredicted RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 MKKSQ9NPJ1 570 aaPredicted RBP11.68□□□□□ -0.54
USP1-203ENST00000442679 HCN3Q9P1Z3 774 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 TSC22D4Q9Y3Q8 395 aa11.68□□□□□ -0.54
USP1-203ENST00000442679 IGLV3-12A0A075B6K2 115 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 A0A0G2JN53 185 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 C4orf51C9J302 202 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
USP1-203ENST00000442679 DNAJB6O75190 326 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 SH3BGRLO75368 114 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 UMODP07911 640 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 H2AFXP16104 143 aaPredicted RBP11.67□□□□□ -0.54
USP1-203ENST00000442679 PTX3P26022 381 aaPredicted RBP11.67□□□□□ -0.54
USP1-203ENST00000442679 OTX2P32243 289 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 NEK2P51955 445 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 PLA2G16P53816 162 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 NAA20P61599 178 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 PHEXP78562 749 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 KLC1Q07866 573 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 TGM3Q08188 693 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 LCP2Q13094 533 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 IFT88Q13099 833 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 PCLAFQ15004 111 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 DEFB109BQ30KR1 87 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 GGTA1PQ4G0N0 100 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 TMEM35AQ53FP2 167 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 DEPDC1Q5TB30 811 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 FRG2Q64ET8 278 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 LETMD1Q6P1Q0 360 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 TRIM40Q6P9F5 258 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 GPRIN3Q6ZVF9 776 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 TMEM151BQ8IW70 566 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 OR2L5Q8NG80 312 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 OR5T3Q8NGG3 340 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 WDR20Q8TBZ3 569 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 CATSPER2Q96P56 530 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 FRG2BQ96QU4 278 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 ZNF382Q96SR6 550 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 SPSB2Q99619 263 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 MS4A8Q9BY19 250 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 TGIF2Q9GZN2 237 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 GSTO2Q9H4Y5 243 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
USP1-203ENST00000442679 KCNK9Q9NPC2 374 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 TRPS1Q9UHF7 1281 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 ZNF225Q9UK10 706 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 STK38LQ9Y2H1 464 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 ACTL7BQ9Y614 415 aa11.67□□□□□ -0.54
USP1-203ENST00000442679 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
USP1-203ENST00000442679 NBEAQ8NFP9 2946 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 A0A088AWK7 358 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 MAGEB17A8MXT2 336 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 FOXE1O00358 373 aaPredicted RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 SAP18O00422 153 aaKnown RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 CHST10O43529 356 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 TRIM13O60858 407 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 OR4F21O95013 312 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 BMP10O95393 424 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 ZNF10P21506 573 aaPredicted RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 ALDH3A1P30838 453 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 XCR1P46094 333 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 PKNOX1P55347 436 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 RPS13P62277 151 aaKnown RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 OLR1P78380 273 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 ASPHQ12797 758 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 TBR1Q16650 682 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 SGO1Q5FBB7 561 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 KHDRBS2Q5VWX1 349 aaKnown RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 ABHD17CQ6PCB6 329 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 FRMD7Q6ZUT3 714 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 HDXQ7Z353 690 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 UBE3DQ7Z6J8 389 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 RAB43Q86YS6 212 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 ZC3H7AQ8IWR0 971 aaKnown RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 SHISA5Q8N114 240 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 CDYL2Q8N8U2 506 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 SRFBP1Q8NEF9 429 aaKnown RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 ADAMTS17Q8TE56 1095 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 THAP4Q8WY91 577 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms