RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 FAM126AQ9BYI3 521 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RBCK1Q9BYM8 510 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SERHL2Q9H4I8 314 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CCSER2Q9H7U1 834 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FKBPLQ9UIM3 349 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SPIN1Q9Y657 262 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CFAP20Q9Y6A4 193 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LOC730098B7Z3J9 87 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FPGTO14772 594 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CASKO14936 926 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LYRM1O43325 122 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RGS14O43566 566 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CCNB2O95067 398 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PRAMEF1O95521 474 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 DNAJB2P25686 324 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CNR2P34972 360 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 HAAOP46952 286 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 DCDC1P59894 354 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 OLR1P78380 273 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RGS1Q08116 209 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TSTA3Q13630 321 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FGL2Q14314 439 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FAM187BQ17R55 369 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SPATS1Q496A3 300 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SV2CQ496J9 727 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ZBTB37Q5TC79 503 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FCRLBQ6BAA4 426 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RASSF6Q6ZTQ3 369 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FAM92BQ6ZTR7 304 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 MOB2Q70IA6 237 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CLDN19Q8N6F1 224 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 GPR152Q8TDT2 470 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 REPS1Q96D71 796 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TMEM80Q96HE8 168 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CDKN2AIPNLQ96HQ2 116 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PPP3R2Q96LZ3 170 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LINC00052Q96N35 136 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CPPED1Q9BRF8 314 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SLC25A51Q9H1U9 297 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 MIXL1Q9H2W2 232 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 B3GNT2Q9NY97 397 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RNF181Q9P0P0 153 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ING4Q9UNL4 249 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TNPO3Q9Y5L0 923 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CASTOR2A6NHX0 329 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 MEIS3P2A8K0S8 358 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ARNTLO00327 626 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 AKAP8O43823 692 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TPST2O60704 377 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ENTPD6O75354 484 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RPP40O75818 363 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 KDM4BO94953 1096 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CFDP00746 253 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RETP07949 1114 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RPS2P15880 293 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 GGT2P36268 569 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ACVRL1P37023 503 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 STC1P52823 247 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 LILRA4P59901 499 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ERVFC1P60507 584 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RRAS2P62070 204 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 RPS14P62263 151 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CSTF1Q05048 431 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 EXOSC2Q13868 293 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 INSL4Q14641 139 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 KLHL12Q53G59 568 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PIK3R6Q5UE93 754 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 MZT2BQ6NZ67 158 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FAM180BQ6P0A1 224 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FAM171BQ6P995 826 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 C17orf107Q6ZR85 190 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 USP30Q70CQ3 517 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 KANSL1Q7Z3B3 1105 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ADGRD2Q7Z7M1 963 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SETD6Q8TBK2 473 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ASZ1Q8WWH4 475 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SLC5A11Q8WWX8 675 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SELENOMQ8WWX9 145 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 NTAN1Q96AB6 310 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 ART5Q96L15 291 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CCDC115Q96NT0 180 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 SAMD11Q96NU1 681 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 OPALINQ96PE5 141 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 DCLRE1CQ96SD1 692 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TCF25Q9BQ70 676 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 NXF2Q9GZY0 626 aaKnown RBP7.25□□□□□ -1.25
HDAC9-214ENST00000441542 CATSPERBQ9H7T0 1116 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 HHATLQ9HCP6 504 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 WASH6PQ9NQA3 447 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 HEBP1Q9NRV9 189 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TMEM161AQ9NX61 479 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 PDE4DIPQ5VU43 2346 aa7.25□□□□□ -1.25
HDAC9-214ENST00000441542 TEX51A0A1B0GUA7 166 aa7.24□□□□□ -1.25
HDAC9-214ENST00000441542 OR7A17O14581 309 aa7.24□□□□□ -1.25
HDAC9-214ENST00000441542 SUV39H1O43463 412 aa7.24□□□□□ -1.25
HDAC9-214ENST00000441542 ORC5O43913 435 aa7.24□□□□□ -1.25
HDAC9-214ENST00000441542 RFPL3O75679 317 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms