RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CYC1P08574 325 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 C8orf89P0DMQ9 161 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 COL6A2P12110 1019 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 IL10P22301 178 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 HNRNPH1P31943 449 aaKnown RBP22.31■■□□□ 1.16
VARS-217ENST00000440048 NAA30Q147X3 362 aaPredicted RBP22.31■■□□□ 1.16
VARS-217ENST00000440048 NADK2Q4G0N4 442 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 PAGE2BQ5JRK9 111 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 LGSNQ5TDP6 509 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 ADNP2Q6IQ32 1131 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 HPS6Q86YV9 775 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 TEX9Q8N6V9 391 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 METTL21AQ8WXB1 218 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 OR1F2PQ96R84 312 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 RBCK1Q9BYM8 510 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 LHPPQ9H008 270 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 RHBGQ9H310 441 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 LANCL2Q9NS86 450 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 LRIT2A6NDA9 550 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 LRRC14BA6NHZ5 514 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 TBX6O95947 436 aaPredicted RBP22.3■■□□□ 1.16
VARS-217ENST00000440048 RBP1P09455 135 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 EPB42P16452 691 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 TLE1Q04724 770 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 PCDH1Q08174 1060 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 HIST2H2ACQ16777 129 aaPredicted RBP22.3■■□□□ 1.16
VARS-217ENST00000440048 TSNAXIP1Q2TAA8 658 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 HIST2H2AA3Q6FI13 130 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 LANCL3Q6ZV70 420 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 RBMXL3Q8N7X1 1067 aaKnown RBP22.3■■□□□ 1.16
VARS-217ENST00000440048 GAL3ST3Q96A11 431 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 MS4A6EQ96DS6 147 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 THOC3Q96J01 351 aaKnown RBP22.3■■□□□ 1.16
VARS-217ENST00000440048 SCYL1Q96KG9 808 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 ZNF700Q9H0M5 742 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 CLK4Q9HAZ1 481 aaKnown RBP22.3■■□□□ 1.16
VARS-217ENST00000440048 ANGPTL3Q9Y5C1 460 aa22.3■■□□□ 1.16
VARS-217ENST00000440048 CDC123O75794 336 aaPredicted RBP22.29■■□□□ 1.16
VARS-217ENST00000440048 FHP07954 510 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 TNFRSF8P28908 595 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 BTN3A2P78410 334 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 RHAGQ02094 409 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 PCOLCEQ15113 449 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 PCBP2Q15366 365 aaKnown RBP eCLIP22.29■■□□□ 1.16
VARS-217ENST00000440048 IRAK1BP1Q5VVH5 260 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 TIFABQ6ZNK6 161 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 TBC1D20Q96BZ9 403 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 MTBPQ96DY7 904 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 MFRPQ9BY79 579 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 ZBTB20Q9HC78 741 aaPredicted RBP22.29■■□□□ 1.16
VARS-217ENST00000440048 RIC8BQ9NVN3 520 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 XPR1Q9UBH6 696 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 FETUBQ9UGM5 382 aa22.29■■□□□ 1.16
VARS-217ENST00000440048 SPENQ96T58 3664 aaKnown RBP22.29■■□□□ 1.16
VARS-217ENST00000440048 A0A0G2JN53 185 aa22.28■■□□□ 1.16
VARS-217ENST00000440048 ERI3O43414 337 aaKnown RBP22.28■■□□□ 1.16
VARS-217ENST00000440048 ZNF500O60304 480 aaPredicted RBP22.28■■□□□ 1.16
VARS-217ENST00000440048 SIX3O95343 332 aaPredicted RBP22.28■■□□□ 1.16
VARS-217ENST00000440048 ADPRMQ3LIE5 342 aa22.28■■□□□ 1.16
VARS-217ENST00000440048 CPEB2Q7Z5Q1 589 aaKnown RBP22.28■■□□□ 1.16
VARS-217ENST00000440048 KBTBD2Q8IY47 623 aa22.28■■□□□ 1.16
VARS-217ENST00000440048 PTGR2Q8N8N7 351 aaPredicted RBP22.28■■□□□ 1.16
VARS-217ENST00000440048 PLPP5Q8NEB5 264 aa22.28■■□□□ 1.16
VARS-217ENST00000440048 FAR2Q96K12 515 aa22.28■■□□□ 1.16
VARS-217ENST00000440048 ANKZF1Q9H8Y5 726 aa22.28■■□□□ 1.16
VARS-217ENST00000440048 TNPO3Q9Y5L0 923 aaKnown RBP22.28■■□□□ 1.16
VARS-217ENST00000440048 CD97P48960 835 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 GTF2H2Q13888 395 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 AGAP7PQ5VUJ5 663 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 JMJD6Q6NYC1 403 aaPredicted RBP22.27■■□□□ 1.16
VARS-217ENST00000440048 GTF2H2CQ6P1K8 395 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 MED27Q6P2C8 311 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 IGFL3Q6UXB1 125 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 ANKRD37Q7Z713 158 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 LAS2Q8IYD9 372 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 CA13Q8N1Q1 262 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 OR2L5Q8NG80 312 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 UBE2E3Q969T4 207 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 IMMP1LQ96LU5 166 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 AGAP4Q96P64 663 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 QRFPRQ96P65 431 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 REXO4Q9GZR2 422 aaKnown RBP22.27■■□□□ 1.16
VARS-217ENST00000440048 PSMC3IPQ9P2W1 217 aaPredicted RBP22.27■■□□□ 1.16
VARS-217ENST00000440048 C19orf25Q9UFG5 118 aaPredicted RBP22.27■■□□□ 1.16
VARS-217ENST00000440048 TMCO1Q9UM00 188 aa22.27■■□□□ 1.16
VARS-217ENST00000440048 IGHV3-20A0A0C4DH32 117 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 E2F3O00716 465 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 B4GALT2O60909 372 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 SERPINA7P05543 415 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 CELA2AP08217 269 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 PRR35P0CG20 571 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 RNH1P13489 461 aaKnown RBP22.26■■□□□ 1.15
VARS-217ENST00000440048 JAK1P23458 1154 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 HPDP32754 393 aaPredicted RBP22.26■■□□□ 1.15
VARS-217ENST00000440048 PLA2G16P53816 162 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 ABRAXAS2Q15018 415 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 SLC6A19Q695T7 634 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 GRHL2Q6ISB3 625 aa22.26■■□□□ 1.15
VARS-217ENST00000440048 METTL2BQ6P1Q9 378 aaKnown RBP22.26■■□□□ 1.15
VARS-217ENST00000440048 GOLGA7Q7Z5G4 137 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms