RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 METTL23Q86XA0 190 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 RGL4Q8IZJ4 473 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 SNAPC3Q92966 411 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 CEP295NLQ96MC4 621 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 VPS9D1Q9Y2B5 631 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 NUP214P35658 2090 aaPredicted RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 CCDC182A6NF36 153 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 EFCAB10A6NFE3 127 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 GFRA2O00451 464 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ULK1O75385 1050 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 CD9P21926 228 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 KDELR2P33947 212 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF235Q14590 738 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 TMPRSS11AQ6ZMR5 421 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 RNF130Q86XS8 419 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 FAM20CQ8IXL6 584 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 PGBD3Q8N328 593 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZFAND1Q8TCF1 268 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 SMG7Q92540 1137 aaKnown RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 BHMTQ93088 406 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 EPYCQ99645 322 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 BBS2Q9BXC9 721 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF717Q9BY31 904 aaPredicted RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 RUBCNLQ9H714 662 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 NMUR1Q9HB89 426 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF226Q9NYT6 803 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 TAS2R16Q9NYV7 291 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 GPRC5BQ9NZH0 403 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 SNX7Q9UNH6 387 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 OR6C70A6NIJ9 312 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 IQCF5A8MTL0 148 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 FFAR2O15552 330 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 C1QCP02747 245 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ESR1P03372 595 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 FCARP24071 287 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 IDH2P48735 452 aaKnown RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 RPS14P62263 151 aaKnown RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 BNC1Q01954 994 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 HYAL2Q12891 473 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 EIF4HQ15056 248 aaKnown RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF79Q15937 498 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 VMACQ2NL98 169 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 SDHAF4Q5VUM1 108 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 C19orf48Q6RUI8 117 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 SBSNQ6UWP8 590 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 CCDC149Q6ZUS6 474 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 GAREM2Q75VX8 874 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 EIF3MQ7L2H7 374 aaKnown RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 GLT6D1Q7Z4J2 308 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 TRIM46Q7Z4K8 759 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 SERPINA11Q86U17 422 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ATCAYQ86WG3 371 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZZZ3Q8IYH5 903 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 THEM5Q8N1Q8 247 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 GPR152Q8TDT2 470 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 OR5M11Q96RB7 305 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 TRIB3Q96RU7 358 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 PRRG3Q9BZD7 231 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 ABI2Q9NYB9 513 aaPredicted RBP8.24□□□□□ -1.09
HPS4-206ENST00000439453 ZNF451Q9Y4E5 1061 aa8.24□□□□□ -1.09
HPS4-206ENST00000439453 A0A1W2PQ72 361 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MANBAO00462 879 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 TNFRSF10BO14763 440 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 TAPBPO15533 448 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 GPX5O75715 221 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 GUCA1CO95843 209 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 RHOP08100 348 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 CEBPBP17676 345 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 M6PRP20645 277 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MYL9P24844 172 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ERP29P30040 261 aaKnown RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 MLLT3P42568 568 aaPredicted RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 IL12RB1P42701 662 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 TTPAP49638 278 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 CLDN8P56748 225 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 SCN1BQ07699 218 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 EFR3AQ14156 821 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MED22Q15528 200 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 CBLL1Q75N03 491 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ADAMTSL2Q86TH1 951 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 NATD1Q8N6N6 113 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 KCNJ9Q92806 393 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 COQ8BQ96D53 544 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 FUBP3Q96I24 572 aaKnown RBP eCLIP8.23□□□□□ -1.09
HPS4-206ENST00000439453 MAP6Q96JE9 813 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 SERPINB11Q96P15 392 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MGLLQ99685 303 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 SRRQ9GZT4 340 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ABCB8Q9NUT2 735 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ELOVL2Q9NXB9 296 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 A0A1W2PQH9 124 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 RFXANKO14593 260 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 POLR1CO15160 346 aaPredicted RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 ARHGEF9O43307 516 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 WDR47O94967 919 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 NUDT1P36639 197 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ACVRL1P37023 503 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 SMARCB1Q12824 385 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms