RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 RTN4RL2Q86UN3 420 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 VASH2Q86V25 355 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 NUDT13Q86X67 352 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CDK20Q8IZL9 346 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 NKAPQ8N5F7 415 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TSPYL6Q8N831 410 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMEM116Q8NCL8 245 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 OR52N5Q8NH56 324 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 MOSPD2Q8NHP6 518 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 C9orf43Q8TAL5 461 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 FBXO30Q8TB52 745 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CHPT1Q8WUD6 406 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZFAND2BQ8WV99 257 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ARNTL2Q8WYA1 636 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ARHGEF2Q92974 986 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 HVCN1Q96D96 273 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 PDLIM5Q96HC4 596 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 FAM81BQ96LP2 452 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZNF582Q96NG8 517 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 DDOQ99489 341 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 GFI1Q99684 422 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 HGH1Q9BTY7 390 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 LMF2Q9BU23 707 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 VN1R1Q9GZP7 353 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMX4Q9H1E5 349 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ATP13A3Q9H7F0 1226 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 DNAJC18Q9H819 358 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 GNB4Q9HAV0 340 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CHMP1AQ9HD42 196 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 MAN2C1Q9NTJ4 1040 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 P4HTMQ9NXG6 502 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 WSB2Q9NYS7 404 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ABCD2Q9UBJ2 740 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CACNG4Q9UBN1 327 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CNOT8Q9UFF9 292 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ARHGAP26Q9UNA1 814 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 RIPK3Q9Y572 518 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CYP46A1Q9Y6A2 500 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 POLEQ07864 2286 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZMYM6O95789 1325 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 SEC16AO15027 2179 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 BAZ2BQ9UIF8 2168 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 DNAH3Q8TD57 4116 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ARFGEF2Q9Y6D5 1785 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 F5P12259 2224 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 KNTC1P50748 2209 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 IGKV6-21A0A0C4DH24 114 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 HYKKA2RU49 373 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 O00370 1275 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 KRTAP5-8O75690 187 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 C9P02748 559 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 PRB2P02812 416 aaPredicted RBP0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ACP2P11117 423 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 UBL4AP11441 157 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SELLP14151 372 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ANPEPP15144 967 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ABCD3P28288 659 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ACADLP28330 430 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 EPHA8P29322 1005 aaPredicted RBP0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 PDHA2P29803 388 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SOX3P41225 446 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SLC9A3P48764 834 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 HARS2P49590 506 aaKnown RBP0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ARSEP51690 589 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 KLC1Q07866 573 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMEM115Q12893 351 aaPredicted RBP0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 PRKAA1Q13131 559 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZNF177Q13360 481 aaPredicted RBP0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 RUNX3Q13761 415 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 TAB1Q15750 504 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SLC35D3Q5M8T2 416 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 CASC10Q5T4H9 136 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 GDPGP1Q6ZNW5 385 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 Q6ZRP5 223 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 COMMD2Q86X83 199 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 CPOQ8IVL8 374 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 CFAP206Q8IYR0 622 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 MAPKAPK5-AS1Q8N8E1 139 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 TRIML1Q8N9V2 468 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 AQP11Q8NBQ7 271 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 OR4D10Q8NGI6 311 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 OR10G7Q8NGN6 311 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 METTL6Q8TCB7 284 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 AGAP11Q8TF27 550 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ATP8B4Q8TF62 1192 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ST8SIA4Q92187 359 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZNF597Q96LX8 424 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 C10orf90Q96M02 699 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SPAG5Q96R06 1193 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 FNBP1Q96RU3 617 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SLC22A12Q96S37 553 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 LPAR4Q99677 370 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 BTBD10Q9BSF8 475 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 UBAC1Q9BSL1 405 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 SLA2Q9H6Q3 261 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 JPT2Q9H910 190 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 JMJD4Q9H9V9 463 aa0.88□□□□□ -2.27
HMGN1P33-201ENST00000432945 TRPV4Q9HBA0 871 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms