RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PPP1R16AQ96I34 528 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 TRIB3Q96RU7 358 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 KATNBL1Q9H079 304 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
CPNE4-201ENST00000429747 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 TCRBV5S2A0A599 114 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 E7EQ34 232 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 BTN3A3O00478 584 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 UPK1BO75841 260 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 NUDT7P0C024 238 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 TIA1P31483 386 aaKnown RBP eCLIP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 DAPP51397 102 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SUOXP51687 545 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 ANGPT1Q15389 498 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CTU2Q2VPK5 515 aaKnown RBP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 PLEKHS1Q5SXH7 462 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CRTC1Q6UUV9 634 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 ADAMTS15Q8TE58 950 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SLC9A6Q92581 669 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CPPED1Q9BRF8 314 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 NTMT1Q9BV86 223 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 YIPF2Q9BWQ6 316 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CPNE3O75131 537 aaKnown RBP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 MYL9P24844 172 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 MAPK9P45984 424 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 HNRNPA0Q13151 305 aaKnown RBP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 ADPRMQ3LIE5 342 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SMARCD3Q6STE5 483 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 RASSF5Q8WWW0 418 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 IKZF5Q9H5V7 419 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CPNE5Q9HCH3 593 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 RPS6KB2Q9UBS0 482 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 ING4Q9UNL4 249 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 ERVK-11Q9UQG0 969 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 PGRMC2O15173 223 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 DYRK3O43781 588 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SLC2A2P11168 524 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-201ENST00000429747 FSHRP23945 695 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CBLBQ13191 982 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SP140Q13342 867 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 REEP3Q6NUK4 255 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 TMIGD1Q6UXZ0 262 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 OR8H1Q8NGG4 311 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 CD99L2Q8TCZ2 262 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 ING5Q8WYH8 240 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 TBX5Q99593 518 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SLC12A9Q9BXP2 914 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 TAS2R9Q9NYW1 312 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 PLAGL1Q9UM63 463 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 MAN2B2Q9Y2E5 1009 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 PCDHGB6Q9Y5F9 930 aa12.16□□□□□ -0.46
CPNE4-201ENST00000429747 SLC9A3R1O14745 358 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 CA12O43570 354 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 JUNBP17275 347 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 CCR7P32248 378 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 CNR2P34972 360 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 BNC1Q01954 994 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 PRAMEF14Q5SWL7 426 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 PRAMEF13Q5VWM6 474 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF367Q7RTV3 350 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 C7orf57Q8NEG2 295 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 RHOXF1Q8NHV9 184 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 OR8D1Q8WZ84 308 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 TMEM80Q96HE8 168 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 DEFB118Q96PH6 123 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 PIP5K1AQ99755 562 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 BCL7BQ9BQE9 202 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 TTYH2Q9BSA4 534 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ZSCAN5AQ9BUG6 496 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ELOVL2Q9NXB9 296 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 MYO10Q9HD67 2058 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 GSAPA4D1B5 854 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ADAM12O43184 909 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 AQP9O43315 295 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 B3GALT4O96024 378 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 DHFRP00374 187 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 IFI30P13284 250 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 PTNP21246 168 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 RPS3P23396 243 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 DGKGP49619 791 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 SGSHP51688 502 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 KCNC4Q03721 635 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 SPHARQ15513 63 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 IRAK1BP1Q5VVH5 260 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 MACC1Q6ZN28 852 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 FLCNQ8NFG4 579 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 MND1Q9BWT6 205 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 TSSK6Q9BXA6 273 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 IGLV3-10A0A075B6K4 115 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 SCAMP2O15127 329 aaKnown RBP12.15□□□□□ -0.46
CPNE4-201ENST00000429747 SLC16A8O95907 504 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 ITGAMP11215 1152 aa12.15□□□□□ -0.46
CPNE4-201ENST00000429747 AMD1P17707 334 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms