RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 H0YIV9 168 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CREG1O75629 220 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ZWINTO95229 277 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CAPN1P07384 714 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 BPGMP07738 259 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 RAB40ALP0C0E4 278 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 PTX3P26022 381 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 GSTM2P28161 218 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 GCGRP47871 477 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 SERPINB4P48594 390 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 SKP1P63208 163 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 HYAL2Q12891 473 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 DSG2Q14126 1118 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 COL28A1Q2UY09 1125 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 MINDY4Q4G0A6 757 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 FRG2Q64ET8 278 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ZNF385CQ66K41 422 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 SCIMPQ6UWF3 145 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 FAM198BQ6UWH4 519 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 PDSS2Q86YH6 399 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 OR5T3Q8NGG3 340 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 OR51Q1Q8NH59 317 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ZNF473Q8WTR7 871 aaKnown RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 SELENOMQ8WWX9 145 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 MVB12AQ96EY5 273 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 FRG2BQ96QU4 278 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 HBEGFQ99075 208 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CENPKQ9BS16 269 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 GATA5Q9BWX5 397 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 ACBD3Q9H3P7 528 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 SSU72Q9NP77 194 aaKnown RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 FARSBQ9NSD9 589 aaKnown RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 ADGRE2Q9UHX3 823 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 TCFL5Q9UL49 500 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 MAP1BP46821 2468 aaKnown RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 TMEM120BA0PK00 339 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 H0YIG0 161 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 RTCAO00442 366 aaKnown RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 UBFD1O14562 309 aaKnown RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 TM9SF1O15321 606 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 DNAJB6O75190 326 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 NSA2O95478 260 aaKnown RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 CD63P08962 238 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 SERPINB1P30740 379 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 PKNOX1P55347 436 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 MC1RQ01726 317 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 PCDH1Q08174 1060 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 MPP2Q14168 576 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 NKG7Q16617 165 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 AP5B1Q2VPB7 878 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 TNFAIP8L3Q5GJ75 292 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 TCHHL1Q5QJ38 904 aaPredicted RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 KHDRBS2Q5VWX1 349 aaKnown RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 FAAH2Q6GMR7 532 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 ZNF517Q6ZMY9 492 aaPredicted RBP13.8□□□□□ -0.2
SGCE-204ENST00000428696 FRMD7Q6ZUT3 714 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 OR2L5Q8NG80 312 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 STT3BQ8TCJ2 826 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 GAL3ST3Q96A11 431 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 PEX11GQ96HA9 241 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 SLC45A3Q96JT2 553 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 KCNA7Q96RP8 456 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 ZNF382Q96SR6 550 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 VIPAS39Q9H9C1 493 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 DMRT3Q9NQL9 472 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
SGCE-204ENST00000428696 MDC1Q14676 2089 aaKnown RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 A0A088AWK7 358 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 PSMD12O00232 456 aaPredicted RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 CHST10O43529 356 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 B3GALT2O43825 422 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 GALR3O60755 368 aaPredicted RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 B4GALT2O60909 372 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ULK1O75385 1050 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 JRKO75564 520 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 CDC123O75794 336 aaPredicted RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 ESRRBO95718 433 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 PDYNP01213 254 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 KRT6AP02538 564 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ALBP02768 609 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 KRT6BP04259 564 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 HEXBP07686 556 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ZGLP1P0C6A0 271 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ZNF10P21506 573 aaPredicted RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 SERPINB3P29508 390 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 PIK3CBP42338 1070 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 SSR2P43308 183 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 XCR1P46094 333 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 KRT6CP48668 564 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 DEFB109BQ30KR1 87 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 TMEM35AQ53FP2 167 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 AGBL2Q5U5Z8 902 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms