RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TEX19Q8NA77 164 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 METTL21AQ8WXB1 218 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 PHF21BQ96EK2 531 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 OR1F2PQ96R84 312 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 MRPL57Q9BQC6 102 aaKnown RBP21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 MRPL46Q9H2W6 279 aaKnown RBP21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 ANAPC2Q9UJX6 822 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 TMCO1Q9UM00 188 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 PCDHGB7Q9Y5F8 929 aa21.08■□□□□ 0.97
PTCHD3P2-201ENST00000424937 IGHV1-45A0A0A0MS14 117 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 LRIT2A6NDA9 550 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PCDH17O14917 1159 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 DNAJB6O75190 326 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 WFS1O76024 890 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 SMIM10L1P0DMW3 83 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PCNAP12004 261 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 VSNL1P62760 191 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 GTF2H2Q13888 395 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 IRAK1BP1Q5VVH5 260 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 GRHL2Q6ISB3 625 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 GTF2H2CQ6P1K8 395 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 MED27Q6P2C8 311 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 TMEM205Q6UW68 189 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ATG14Q6ZNE5 492 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 UBE2E3Q969T4 207 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 MS4A6EQ96DS6 147 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 SMIM10Q96HG1 83 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 FAR2Q96K12 515 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 SMAD5Q99717 465 aaKnown RBP21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 RHBGQ9H310 441 aa21.07■□□□□ 0.96
PTCHD3P2-201ENST00000424937 OR2W5A6NFC9 320 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 GOLGA8RI6L899 631 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ALPPP05187 535 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 CYC1P08574 325 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 IL10P22301 178 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 HPDP32754 393 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PIK3CGP48736 1102 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PLA2G16P53816 162 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 SOX8P57073 446 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 BTN3A2P78410 334 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PCDH1Q08174 1060 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 Q0VFX4 171 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 LANCL3Q6ZV70 420 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 NDUFAF7Q7L592 441 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 TBC1D20Q96BZ9 403 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 REXO4Q9GZR2 422 aaKnown RBP21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ACTR8Q9H981 624 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 LANCL2Q9NS86 450 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 RIC8BQ9NVN3 520 aa21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 V9GYY5 206 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3P2-201ENST00000424937 CPAMD8Q8IZJ3 1885 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 LOC102723996A0A087X1L8 192 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 A0A1W2PQ72 361 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 SMIM23A6NLE4 172 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 STX16-NPEPL1H3BU86 382 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 E2F3O00716 465 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 STX16O14662 325 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 KLHL41O60662 606 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 TBX6O95947 436 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 FHP07954 510 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 JAK1P23458 1154 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ARL1P40616 181 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 SLCO1A2P46721 670 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PCOLCEQ15113 449 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ADPRMQ3LIE5 342 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 METTL2BQ6P1Q9 378 aaKnown RBP21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 TRIM40Q6P9F5 258 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 LAS2Q8IYD9 372 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 CA13Q8N1Q1 262 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 OR2L5Q8NG80 312 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 THOC3Q96J01 351 aaKnown RBP21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 TRIM4Q9C037 500 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ZNF552Q9H707 407 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 IPPKQ9H8X2 491 aa21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 C19orf25Q9UFG5 118 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3P2-201ENST00000424937 A0A088AWK7 358 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PSMD12O00232 456 aaPredicted RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 DPM1O60762 260 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 RNH1P13489 461 aaKnown RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ZNF10P21506 573 aaPredicted RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 RHAGQ02094 409 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 DDX39BQ13838 428 aaKnown RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ABRAXAS2Q15018 415 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 CNPY4Q8N129 248 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 OR7G3Q8NG95 312 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ACMSDQ8TDX5 336 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ZNF473Q8WTR7 871 aaKnown RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 MZB1Q8WU39 189 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 F2RL3Q96RI0 385 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 MS4A8Q9BY19 250 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 LHPPQ9H008 270 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 ZNF700Q9H0M5 742 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 EPN3Q9H201 632 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 COPS7BQ9H9Q2 264 aaPredicted RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 CLK4Q9HAZ1 481 aaKnown RBP21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 C5AR2Q9P296 337 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 PCTPQ9UKL6 214 aa21.04■□□□□ 0.96
PTCHD3P2-201ENST00000424937 IGHV3-20A0A0C4DH32 117 aa21.03■□□□□ 0.96
PTCHD3P2-201ENST00000424937 A8MT66 165 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms