RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 UBLCP1Q8WVY7 318 aaPredicted RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 GAL3ST3Q96A11 431 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 TBC1D20Q96BZ9 403 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 C8orf44Q96CB5 159 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 WDR34Q96EX3 536 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 PEX11GQ96HA9 241 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 AGAP4Q96P64 663 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 SMAD5Q99717 465 aaKnown RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 VN1R1Q9GZP7 353 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 LHPPQ9H008 270 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 COPS7BQ9H9Q2 264 aaPredicted RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 ZNF160Q9HCG1 818 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 PSMC3IPQ9P2W1 217 aaPredicted RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 COPG2Q9UBF2 871 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 XPR1Q9UBH6 696 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 FETUBQ9UGM5 382 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 SPTA1P02549 2419 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 MASP2O00187 686 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ERI3O43414 337 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 CHST10O43529 356 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 KLK8O60259 260 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ZNF500O60304 480 aaPredicted RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 JRKO75564 520 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 FHP07954 510 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 PCNAP12004 261 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 COX6A1P12074 109 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 RNH1P13489 461 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 ICAM2P13598 275 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 MTHFD2P13995 350 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 TNFRSF8P28908 595 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 SERPINB1P30740 379 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ARL1P40616 181 aaPredicted RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 CASP2P42575 452 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 OLR1P78380 273 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 PHEXP78562 749 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 RCN2Q14257 317 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 NAA30Q147X3 362 aaPredicted RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 PCBP2Q15366 365 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP49-204ENST00000423567 TECRLQ5HYJ1 363 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 TMEM205Q6UW68 189 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 PLD6Q8N2A8 252 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 ZADH2Q8N4Q0 377 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 PTGR2Q8N8N7 351 aaPredicted RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 SRFBP1Q8NEF9 429 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 OR5T3Q8NGG3 340 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ATP6V1E2Q96A05 226 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 REPS1Q96D71 796 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 THOC3Q96J01 351 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 GPR78Q96P69 363 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 MRPL57Q9BQC6 102 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 TUBB6Q9BUF5 446 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ROGDIQ9GZN7 287 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 REXO4Q9GZR2 422 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 MRPL46Q9H2W6 279 aaKnown RBP10.33□□□□□ -0.76
USP49-204ENST00000423567 ACTR8Q9H981 624 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 PPCSQ9HAB8 311 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ZNF358Q9NW07 568 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ADGRE2Q9UHX3 823 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 ASB1Q9Y576 335 aa10.33□□□□□ -0.76
USP49-204ENST00000423567 KALRNO60229 2985 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 ANKRD12Q6UB98 2062 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 LOC102723996A0A087X1L8 192 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 IGHV1-45A0A0A0MS14 117 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 A0A1W2PQ72 361 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 LRIT2A6NDA9 550 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 TTLL8A6PVC2 850 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 STX16-NPEPL1H3BU86 382 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 STX16O14662 325 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 B3GALT2O43825 422 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 UGDHO60701 494 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 B4GALT2O60909 372 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 CDC123O75794 336 aaPredicted RBP10.32□□□□□ -0.76
USP49-204ENST00000423567 WFS1O76024 890 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 TAC1P20366 129 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 PLA2G16P53816 162 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 SNRPNP63162 240 aaKnown RBP10.32□□□□□ -0.76
USP49-204ENST00000423567 BTN3A2P78410 334 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 TLE1Q04724 770 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 ACTN3Q08043 901 aaPredicted RBP10.32□□□□□ -0.76
USP49-204ENST00000423567 HYAL2Q12891 473 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 GTF2H2Q13888 395 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 NSDHLQ15738 373 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 LIPJQ5W064 366 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 GTF2H2CQ6P1K8 395 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 TIFABQ6ZNK6 161 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 CHSY3Q70JA7 882 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 CPEB2Q7Z5Q1 589 aaKnown RBP10.32□□□□□ -0.76
USP49-204ENST00000423567 LCA5Q86VQ0 697 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 PLPP5Q8NEB5 264 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 ARMC2Q8NEN0 867 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 OR2L5Q8NG80 312 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 ADAMTS18Q8TE60 1221 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 MS4A6EQ96DS6 147 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 PHF21BQ96EK2 531 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 CENPKQ9BS16 269 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 NPLQ9BXD5 320 aaPredicted RBP10.32□□□□□ -0.76
USP49-204ENST00000423567 RBCK1Q9BYM8 510 aa10.32□□□□□ -0.76
USP49-204ENST00000423567 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms