RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 AICDAQ9GZX7 198 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 LRMDAQ9H2I8 198 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF768Q9H5H4 540 aaKnown RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 SYNPO2LQ9H987 977 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 EFCAB1Q9HAE3 211 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 PDE7BQ9NP56 450 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 MYNNQ9NPC7 610 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 PRDM7Q9NQW5 492 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 NDE1Q9NXR1 346 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 NDUFAF1Q9Y375 327 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 POLR3HQ9Y535 204 aaPredicted RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 TDRD6O60522 2096 aaKnown RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 ARID1BQ8NFD5 2236 aaPredicted RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 A0A0A6YYD5 115 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 SLC9B1P1A6NJY1 282 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 H0YGG7 62 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 NTN3O00634 580 aaPredicted RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 MAP3K7O43318 606 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 PCDH7O60245 1069 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 NRP2O60462 931 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 KLHL18O94889 574 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 ANXA4P09525 319 aaPredicted RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 DDX5P17844 614 aaKnown RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 PTPN4P29074 926 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 CSF2RBP32927 897 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 POLR2JP52435 117 aaKnown RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 ARF3P61204 181 aaPredicted RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 UFM1P61960 85 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 HSD11B2P80365 405 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 LRRC74AQ0VAA2 488 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 ILKQ13418 452 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 PRTGQ2VWP7 1150 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 TCTE1Q5JU00 501 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 OR4C11Q6IEV9 310 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 MRM1Q6IN84 353 aaKnown RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 TMEM214Q6NUQ4 689 aaKnown RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 IRGCQ6NXR0 463 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 TRIM40Q6P9F5 258 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 NUDT13Q86X67 352 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 PLD3Q8IV08 490 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 MCATQ8IVS2 390 aaKnown RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 DPP10Q8N608 796 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 TEX37Q96LM6 180 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 F2RL3Q96RI0 385 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 C1orf50Q9BV19 199 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 NLNQ9BYT8 704 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 DPY30Q9C005 99 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 MMADHCQ9H3L0 296 aaPredicted RBP13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 LRRN3Q9H3W5 708 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 TAS2R7Q9NYW3 318 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 CCDC167Q9P0B6 97 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 PLCL2Q9UPR0 1127 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 KLHL20Q9Y2M5 609 aa13.58□□□□□ -0.24
SHMT1P1-201ENST00000419974 CABIN1Q9Y6J0 2220 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 A0A088AWK7 358 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 IGHV5-51A0A0C4DH38 117 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 H3BMH7 237 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 GUCY1B2O75343 617 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 EEDO75530 441 aaKnown RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 KCNK5O95279 499 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 LDOC1O95751 146 aaPredicted RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 CD59P13987 128 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 CSRP1P21291 193 aaKnown RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 ZNF10P21506 573 aaPredicted RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 HIST1H1TP22492 207 aaPredicted RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 TACR1P25103 407 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 IL12AP29459 219 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 CPOXP36551 454 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 RAP1GDS1P52306 607 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 GFERP55789 205 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 KCNK10P57789 538 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 NCALDP61601 193 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 TRA2AQ13595 282 aaKnown RBP eCLIP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 PDE7AQ13946 482 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 PTGR1Q14914 329 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 SPRED3Q2MJR0 410 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 ABHD13Q7L211 337 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 ARHGAP22Q7Z5H3 698 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 R3HCC1LQ7Z5L2 792 aaKnown RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 SNX32Q86XE0 403 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 OR2I1PQ8NGU4 316 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 UTP15Q8TED0 518 aaKnown RBP13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 ROPN1LQ96C74 230 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 COQ8BQ96D53 544 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 SPDL1Q96EA4 605 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 MARK4Q96L34 752 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 PPM1MQ96MI6 270 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 TGM7Q96PF1 710 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 CCDC3Q9BQI4 270 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 BTBD10Q9BSF8 475 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM60AQ9NP50 221 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 TAS2R1Q9NYW7 299 aa13.57□□□□□ -0.24
SHMT1P1-201ENST00000419974 EHD3Q9NZN3 535 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms