RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 GRK2P25098 689 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 SLC1A6P48664 564 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 KRT6CP48668 564 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 PHEXP78562 749 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 CLN3Q13286 438 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 ABRAXAS2Q15018 415 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 NKAIN1Q4KMZ8 207 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 KHDRBS2Q5VWX1 349 aaKnown RBP29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 IL22RA1Q8N6P7 574 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 GAL3ST3Q96A11 431 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 C17orf62Q9BQA9 187 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 LOC101059948A0A1B0GTJ6 334 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 URADA6NGE7 173 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 AZIN1O14977 448 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 DNAJB6O75190 326 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 ULK1O75385 1050 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 KLHL18O94889 574 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 AGXTP21549 392 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 STAT5AP42229 794 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 HERC3Q15034 1050 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 SH2D4BQ5SQS7 431 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 DEPDC1Q5TB30 811 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 UBE3DQ7Z6J8 389 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 ZNF248Q8NDW4 579 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 OR2L5Q8NG80 312 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 CT55Q8WUE5 264 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 COL26A1Q96A83 441 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 ZNF304Q9HCX3 659 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 INTS9Q9NV88 658 aaKnown RBP29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 ACACAQ13085 2346 aa29.01■■■□□ 2.24
CSNK1E-206ENST00000413574 RTCAO00442 366 aaKnown RBP29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 UROSP10746 265 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 PTX3P26022 381 aaPredicted RBP29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 MAT1AQ00266 395 aaKnown RBP29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 SRSF6Q13247 344 aaKnown RBP29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 SYT16Q17RD7 645 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 PRMT9Q6P2P2 845 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 CHSY3Q70JA7 882 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 COX15Q7KZN9 410 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 KCNE4Q8WWG9 221 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 MVB12AQ96EY5 273 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 SORT1Q99523 831 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 SORBS1Q9BX66 1292 aaKnown RBP29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 MANSC1Q9H8J5 431 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 CROTQ9UKG9 612 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 TRAF6Q9Y4K3 522 aa29.01■■■□□ 2.23
CSNK1E-206ENST00000413574 GALR3O60755 368 aaPredicted RBP29■■■□□ 2.23
CSNK1E-206ENST00000413574 RDH16O75452 317 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 NSA2O95478 260 aaKnown RBP29■■■□□ 2.23
CSNK1E-206ENST00000413574 AVPR1BP47901 424 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 OLR1P78380 273 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 BTN3A2P78410 334 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 ARHGAP40Q5TG30 622 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 ABHD17CQ6PCB6 329 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 FAM198BQ6UWH4 519 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 VASH2Q86V25 355 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 AMER3Q8N944 861 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 DPH2Q9BQC3 489 aaPredicted RBP29■■■□□ 2.23
CSNK1E-206ENST00000413574 IFT80Q9P2H3 777 aaPredicted RBP29■■■□□ 2.23
CSNK1E-206ENST00000413574 CDC14AQ9UNH5 594 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 RAXQ9Y2V3 346 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 SCN2AQ99250 2005 aa29■■■□□ 2.23
CSNK1E-206ENST00000413574 TAF4O00268 1085 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 TCN2P20062 427 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 FOXL2P58012 376 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 MLIPQ5VWP3 458 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 KANK2Q63ZY3 851 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 TRIM40Q6P9F5 258 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 ZNF781Q8N8C0 355 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 OR5T3Q8NGG3 340 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 ZCCHC14Q8WYQ9 949 aaKnown RBP28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 ZNF75CPQ92670 426 aaPredicted RBP28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 PRDM7Q9NQW5 492 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 HCN3Q9P1Z3 774 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 SLC12A4Q9UP95 1085 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 PTGDR2Q9Y5Y4 395 aa28.99■■■□□ 2.23
CSNK1E-206ENST00000413574 FGF4P08620 206 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 FBLP22087 321 aaKnown RBP28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 F8A1P23610 371 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 FOXK2Q01167 660 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 TMEM35AQ53FP2 167 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 C10orf62Q5T681 223 aaPredicted RBP28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 TMEM151BQ8IW70 566 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 DYDC1Q8WWB3 177 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 FAR2Q96K12 515 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 PLPP1O14494 284 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 DLSTP36957 453 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 EIF2S3P41091 472 aaKnown RBP28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 FAM69BQ5VUD6 431 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 CLYBLQ8N0X4 340 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 DCBLD2Q96PD2 775 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 YIPF2Q9BWQ6 316 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 ACPTQ9BZG2 426 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 PSD3Q9NYI0 1048 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 CTSFQ9UBX1 484 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 PPT2Q9UMR5 302 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 DNAJC15Q9Y5T4 150 aa28.98■■■□□ 2.23
CSNK1E-206ENST00000413574 H0YIG0 161 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 KLK10O43240 276 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 SNNO75324 88 aaPredicted RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms