RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 DDX39BQ13838 428 aaKnown RBP12.4□□□□□ -0.42
SSB-203ENST00000413002 MYBPC3Q14896 1274 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 GOLGA7Q7Z5G4 137 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 TSLPQ969D9 159 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 NACC2Q96BF6 587 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 MS4A6EQ96DS6 147 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 WDR34Q96EX3 536 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 SMIM10Q96HG1 83 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.42
SSB-203ENST00000413002 NSUN5Q96P11 429 aaKnown RBP12.4□□□□□ -0.42
SSB-203ENST00000413002 EFCAB11Q9BUY7 163 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 EPN3Q9H201 632 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 EHD1Q9H4M9 534 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 NT5DC2Q9H857 520 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 IPPKQ9H8X2 491 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 LANCL2Q9NS86 450 aa12.4□□□□□ -0.42
SSB-203ENST00000413002 HELZ2Q9BYK8 2649 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 IGHV1-45A0A0A0MS14 117 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 NSG1A0A0A6YYJ2 146 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 A0A1W2PPM1 405 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 URADA6NGE7 173 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 SAP18O00422 153 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 RTCAO00442 366 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 CLEC3AO75596 197 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 SEC24DO94855 1032 aaPredicted RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 HPP00738 406 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TGFB1P01137 390 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TSPAN8P19075 237 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 CASP2P42575 452 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 PIK3CGP48736 1102 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 MLLT10P55197 1068 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 STXBP1P61764 594 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 BTG2P78543 158 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TLE1Q04724 770 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 GTF2H2Q13888 395 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 RUNX2Q13950 521 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 PCOLCEQ15113 449 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 PCBP2Q15366 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSB-203ENST00000413002 HIST2H2ACQ16777 129 aaPredicted RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 TSNAXIP1Q2TAA8 658 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 PAGE2BQ5JRK9 111 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 HIST2H2AA3Q6FI13 130 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 GTF2H2CQ6P1K8 395 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TMEM205Q6UW68 189 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 ATG14Q6ZNE5 492 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TIFABQ6ZNK6 161 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 CYP4X1Q8N118 509 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TMEM151AQ8N4L1 468 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 RBMXL3Q8N7X1 1067 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 TTLQ8NG68 377 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 OR2W6PQ8NHA6 318 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 METTL21AQ8WXB1 218 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 GAL3ST3Q96A11 431 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 FAR2Q96K12 515 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 SMAD5Q99717 465 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 REXO4Q9GZR2 422 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 ACTR8Q9H981 624 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 TMEM216Q9P0N5 145 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 COPG2Q9UBF2 871 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
SSB-203ENST00000413002 RNF11Q9Y3C5 154 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 ZNF451Q9Y4E5 1061 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 BSNQ9UPA5 3926 aa12.39□□□□□ -0.43
SSB-203ENST00000413002 IQANK1A0A1B0GTG1 560 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 E2F3O00716 465 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 OR7A17O14581 309 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 SMIM24O75264 130 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 SLU7O95391 586 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 FHP07954 510 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 COL6A2P12110 1019 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 CERS1P27544 350 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 ARL1P40616 181 aaPredicted RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 SOX8P57073 446 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 RHAGQ02094 409 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 LAPTM5Q13571 262 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 NSDHLQ15738 373 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 TBCCQ15814 346 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 IGFBP7Q16270 282 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 CPSF6Q16630 551 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSB-203ENST00000413002 VWA5B1Q5TIE3 1220 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 MED27Q6P2C8 311 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 LINC00696Q6ZRV3 163 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 UBE3DQ7Z6J8 389 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 ANKRD37Q7Z713 158 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 CA13Q8N1Q1 262 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 OR7G3Q8NG95 312 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 ZNF473Q8WTR7 871 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 TBC1D20Q96BZ9 403 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 MTBPQ96DY7 904 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms