RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PNPLA4P41247 253 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 RENBPP51606 427 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 IL18Q14116 193 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 VEZF1Q14119 521 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC39A12Q504Y0 691 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FBXO47Q5MNV8 452 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 C9orf57Q5W0N0 161 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MILR1Q7Z6M3 343 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 METTL3Q86U44 580 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 C10orf111Q8N326 155 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF655Q8N720 491 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 DCBLD1Q8N8Z6 715 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PLA2G15Q8NCC3 412 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 WDR48Q8TAF3 677 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CEP76Q8TAP6 659 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SMG7Q92540 1137 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ERMAPQ96PL5 475 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ULBP1Q9BZM6 244 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LRTM1Q9HBL6 345 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC6A13Q9NSD5 602 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 HPF1Q9NWY4 346 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TXNL4BQ9NX01 149 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 COPS3Q9UNS2 423 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FAM50BQ9Y247 325 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SNX10Q9Y5X0 201 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 BTAF1O14981 1849 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LOC102723532A0A0G2JNH3 316 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LOC285095A0A1B0GVY8 99 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 C7orf66A4D0T2 115 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 YJEFN3A6XGL0 299 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 J3KR12 359 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CCL22O00626 93 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 RFXANKO14593 260 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SUV39H1O43463 412 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ACSL4O60488 711 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 APEX1P27695 318 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 HOXC13P31276 330 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 RECQLP46063 649 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TGM4P49221 684 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ACLYP53396 1101 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PUDPQ08623 228 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 GTF2H2Q13888 395 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 NCF4Q15080 339 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TSC22D1Q15714 1073 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SNAPC1Q16533 368 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 DCAF4L1Q3SXM0 396 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 USP39Q53GS9 565 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 GTF2H2CQ6P1K8 395 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PTCHD4Q6ZW05 846 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 GOLGA7Q7Z5G4 137 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ASPGQ86U10 573 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ADGRF3Q8IZF5 1079 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC5A8Q8N695 610 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 KRTCAP2Q8N6L1 136 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CLRN3Q8NCR9 226 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 OR4A15Q8NGL6 344 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 OTUB1Q96FW1 271 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FOPNLQ96NB1 174 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PRR14Q9BWN1 585 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TMEM39BQ9GZU3 492 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TRPM5Q9NZQ8 1165 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FNIP2Q9P278 1114 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 KCNMB2Q9Y691 235 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 GLYATL1P3A0A0U1RQE8 302 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 M0R233 179 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ABCD4O14678 606 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SULT1B1O43704 296 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CD9P21926 228 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC6A1P30531 599 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CD86P42081 329 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 IL2P60568 153 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 POLR2GP62487 172 aaKnown RBP eCLIP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ITKQ08881 620 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SIRPB2Q5JXA9 342 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF57Q68EA5 555 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MZT2AQ6P582 158 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CNIH2Q6PI25 160 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 BHLHB9Q6PI77 547 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF730Q6ZMV8 503 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CLEC20AQ6ZU45 233 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MS4A15Q8N5U1 240 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PROKR2Q8NFJ6 384 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SIPA1Q96FS4 1042 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TPD52L3Q96J77 140 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 C7orf34Q96L11 122 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 OR2M2Q96R28 347 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 HBEGFQ99075 208 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 NELL2Q99435 816 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MED10Q9BTT4 135 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF436Q9C0F3 470 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 POLR2J2Q9GZM3 115 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF214Q9UL59 606 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 DOCK1Q14185 1865 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 OR7A17O14581 309 aa5.61□□□□□ -1.51
R3HDM1-202ENST00000409478 INPPL1O15357 1258 aa5.61□□□□□ -1.51
R3HDM1-202ENST00000409478 YKT6O15498 198 aa5.61□□□□□ -1.51
R3HDM1-202ENST00000409478 HBP1O60381 514 aa5.61□□□□□ -1.51
R3HDM1-202ENST00000409478 COL6A1P12109 1028 aa5.61□□□□□ -1.51
R3HDM1-202ENST00000409478 CLDN8P56748 225 aa5.61□□□□□ -1.51
R3HDM1-202ENST00000409478 RPS14P62263 151 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms