RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 AICDAQ9GZX7 198 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 MRPL46Q9H2W6 279 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 RHBGQ9H310 441 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 CLK4Q9HAZ1 481 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 ZNF160Q9HCG1 818 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 TMCO1Q9UM00 188 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 NSG1A0A0A6YYJ2 146 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 OR2W5A6NFC9 320 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 C4orf51C9J302 202 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 ERI3O43414 337 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 SHBGP04278 402 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 C8orf89P0DMQ9 161 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 EEF1DP29692 281 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 HNRNPH1P31943 449 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 EFNA3P52797 238 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 EEF1A2Q05639 463 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 GTF2H2Q13888 395 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 IRAK1BP1Q5VVH5 260 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 GTF2H2CQ6P1K8 395 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 METTL2BQ6P1Q9 378 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 MED27Q6P2C8 311 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 TMEM205Q6UW68 189 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 ATG14Q6ZNE5 492 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 MYLK4Q86YV6 388 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 RBCK1Q9BYM8 510 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 REXO4Q9GZR2 422 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 IPPKQ9H8X2 491 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 ACTR8Q9H981 624 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 A0A0G2JN53 185 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 GOLGA8RI6L899 631 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 ALPPP05187 535 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 CYC1P08574 325 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 PCNAP12004 261 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 COX6A1P12074 109 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 PIK3CGP48736 1102 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 PLA2G16P53816 162 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 VSNL1P62760 191 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 COLEC12Q5KU26 742 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 GOLGA7Q7Z5G4 137 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 TBC1D20Q96BZ9 403 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 THOC3Q96J01 351 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 F2RL3Q96RI0 385 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 ZNF552Q9H707 407 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 C5AR2Q9P296 337 aa16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 C19orf25Q9UFG5 118 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-206ENST00000409141 LOC102723996A0A087X1L8 192 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 A0A088AWK7 358 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 IGHV1-45A0A0A0MS14 117 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 STX16-NPEPL1H3BU86 382 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 E2F3O00716 465 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 STX16O14662 325 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 TBX6O95947 436 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 FHP07954 510 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 PLA2G2AP14555 144 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 ZNF10P21506 573 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 JAK1P23458 1154 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 SLCO1A2P46721 670 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 Q0VFX4 171 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 ADPRMQ3LIE5 342 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 LIPJQ5W064 366 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 GRHL2Q6ISB3 625 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 TRIM40Q6P9F5 258 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 HPS6Q86YV9 775 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 KBTBD2Q8IY47 623 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 LAS2Q8IYD9 372 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 OR2L5Q8NG80 312 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 OR7G3Q8NG95 312 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 ACMSDQ8TDX5 336 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 ATP6V1E2Q96A05 226 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 LHPPQ9H008 270 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 LANCL2Q9NS86 450 aa16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 V9GYY5 206 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-206ENST00000409141 TNRC6AQ8NDV7 1962 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 A0A1W2PQ72 361 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 SMIM23A6NLE4 172 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 PSMD12O00232 456 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 DPM1O60762 260 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 B4GALT2O60909 372 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 PYGBP11216 843 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 RNH1P13489 461 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 SERPINB1P30740 379 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 ARL1P40616 181 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 TGM3Q08188 693 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 NSDHLQ15738 373 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 LANCL3Q6ZV70 420 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 CPEB2Q7Z5Q1 589 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 LCA5Q86VQ0 697 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 CA13Q8N1Q1 262 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 TMEM151AQ8N4L1 468 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 PLPP5Q8NEB5 264 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 ZNF473Q8WTR7 871 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 ZNF700Q9H0M5 742 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 NOL11Q9H8H0 719 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 PPCSQ9HAB8 311 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 RIC8BQ9NVN3 520 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 TMEM216Q9P0N5 145 aa16.91■□□□□ 0.3
PDLIM2-206ENST00000409141 ADGRE2Q9UHX3 823 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms