RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ALOX12P18054 663 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PGAM1P18669 254 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 GABRB3P28472 473 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 ART1P52961 327 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 CDKN2DP55273 166 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 SKP1P63208 163 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 MEF2AQ02078 507 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 DHX9Q08211 1270 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PWP1Q13610 501 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 CDSNQ15517 529 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 MAPKAPK3Q16644 382 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 CYP1B1Q16678 543 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PHKG1Q16816 387 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 DUPD1Q68J44 220 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 NIPAL1Q6NVV3 410 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 RPS19BP1Q86WX3 136 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 SIAH3Q8IW03 269 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 TBC1D19Q8N5T2 526 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 FAM98AQ8NCA5 519 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 ZNF740Q8NDX6 193 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 OR56A3Q8NH54 315 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 GABPB2Q8TAK5 448 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 ELP5Q8TE02 316 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 TBC1D20Q96BZ9 403 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PYCR2Q96C36 320 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 MTFMTQ96DP5 389 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 LINGO1Q96FE5 620 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 SNF8Q96H20 258 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 MS4A14Q96JA4 679 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PBKQ96KB5 322 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 FRMD6Q96NE9 622 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 MDFIQ99750 246 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 TSPAN10Q9H1Z9 355 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 ALG2Q9H553 416 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 GPAMQ9HCL2 828 aa8.6□□□□□ -1.03
NIF3L1-203ENST00000409129 PABPN1LA6NDY0 278 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 PRMT3O60678 531 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 B4GALT2O60909 372 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 CLDN14O95500 239 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 TTC4O95801 387 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 TSPAN12O95859 305 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 B3GALT4O96024 378 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 SERPIND1P05546 499 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 CD99P14209 185 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ABOP16442 354 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 JAK1P23458 1154 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 TPP2P29144 1249 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 AP1S2P56377 157 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 IL2P60568 153 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 OLR1P78380 273 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 CRYMQ14894 314 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 DEFB134Q4QY38 66 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 RBM20Q5T481 1227 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 RNASEH2BQ5TBB1 312 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ZNF468Q5VIY5 522 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ABHD13Q7L211 337 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 STRA8Q7Z7C7 330 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 LRRC8AQ8IWT6 810 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 CYP4X1Q8N118 509 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 GHDCQ8N2G8 530 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 KIF2BQ8N4N8 673 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ZNF511Q8NB15 262 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 NT5CQ8TCD5 201 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 GRK7Q8WTQ7 553 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ATL1Q8WXF7 558 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 PTCHD1Q96NR3 888 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 OR4K3Q96R72 315 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 NAP1L3Q99457 506 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 OLFM1Q99784 485 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 TRIM51Q9BSJ1 452 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 TRIM54Q9BYV2 358 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 TRIM45Q9H8W5 580 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 CLK4Q9HAZ1 481 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 ZFP69BQ9UJL9 534 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 PPP2R2CQ9Y2T4 447 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 JRKLQ9Y4A0 524 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 SCN3AQ9NY46 2000 aa8.59□□□□□ -1.03
NIF3L1-203ENST00000409129 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 ZNHIT1O43257 154 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 NME2P1O60361 137 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 SLC25A12O75746 678 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 ZNF888P0CJ79 500 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 CD1EP15812 388 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 NME2P22392 152 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 SSTR2P30874 369 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 TRHRP34981 398 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 AHRP35869 848 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 KIR3DL1P43629 444 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 SCTRP47872 440 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 CYB561P49447 251 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 MLF1P58340 268 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 BTG2P78543 158 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 TLE4Q04727 773 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 RGS1Q08116 209 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 CSHL1Q14406 222 aa8.58□□□□□ -1.04
NIF3L1-203ENST00000409129 RNFT1Q5M7Z0 435 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms