RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 KCNK5O95279 499 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 MT-ND1P03886 318 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 LYNP07948 512 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 ABCB1P08183 1280 aaPredicted RBP18.11■□□□□ 0.49
USP39-202ENST00000409025 CHRM5P08912 532 aaPredicted RBP18.11■□□□□ 0.49
USP39-202ENST00000409025 GSTM2P28161 218 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 CD6P30203 668 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 GSTM5P46439 218 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 C6orf52Q5T4I8 152 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 ZZZ3Q8IYH5 903 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 ZNF687Q8N1G0 1237 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 CBR4Q8N4T8 237 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 PNPT1Q8TCS8 783 aaKnown RBP18.11■□□□□ 0.49
USP39-202ENST00000409025 CREB3L4Q8TEY5 395 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 CIDECQ96AQ7 238 aaPredicted RBP18.11■□□□□ 0.49
USP39-202ENST00000409025 OSBPL11Q9BXB4 747 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 OLAHQ9NV23 265 aa18.11■□□□□ 0.49
USP39-202ENST00000409025 TRBV23OR9-2A0A075B6M9 112 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 C7orf72A4D263 438 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 A6NCN8 305 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 CLOCKO15516 846 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 DEAF1O75398 565 aaPredicted RBP18.1■□□□□ 0.49
USP39-202ENST00000409025 PRKD3O94806 890 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 C6orf47O95873 294 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SERPINA1P01009 418 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 C1QCP02747 245 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 HOXB6P17509 224 aaKnown RBP18.1■□□□□ 0.49
USP39-202ENST00000409025 DDX5P17844 614 aaKnown RBP18.1■□□□□ 0.49
USP39-202ENST00000409025 NUDT1P36639 197 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 BCL6P41182 706 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SLC19A1P41440 591 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 VMACQ2NL98 169 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 TMEM35AQ53FP2 167 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 PTCRAQ6ISU1 281 aaPredicted RBP18.1■□□□□ 0.49
USP39-202ENST00000409025 NRROSQ86YC3 692 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 EPHX4Q8IUS5 362 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 FBXL6Q8N531 539 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 TRIML2Q8N7C3 387 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 FAM86B1Q8N7N1 296 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 TM4SF18Q96CE8 201 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SRMSQ9H3Y6 488 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 OAZ3Q9UMX2 235 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SNX7Q9UNH6 387 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
USP39-202ENST00000409025 MRPS17Q9Y2R5 130 aaKnown RBP18.1■□□□□ 0.49
USP39-202ENST00000409025 LRP4O75096 1905 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 RNF103-CHMP3A0A140T963 221 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 HAT1O14929 419 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 IL1RNP18510 177 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 DDCP20711 480 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 AHRP35869 848 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 HBA1P69905 142 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 GAB1Q13480 694 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 HEPACAMQ14CZ8 416 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SPRED1Q7Z699 444 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SLC22A18ASQ8N1D0 253 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 SLC22A18Q96BI1 424 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 VPS50Q96JG6 964 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 MAGIXQ9H6Y5 334 aa18.1■□□□□ 0.49
USP39-202ENST00000409025 NUP214P35658 2090 aaPredicted RBP18.09■□□□□ 0.49
USP39-202ENST00000409025 A0A1W2PRB8 838 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 PDLIM1O00151 329 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 SOX1O00570 391 aaPredicted RBP18.09■□□□□ 0.49
USP39-202ENST00000409025 ZNF217O75362 1048 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 ZIC1Q15915 447 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 MPEG1Q2M385 716 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 LEXMQ3ZCV2 418 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 PRRT3Q5FWE3 981 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 KIAA1614Q5VZ46 1190 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 OR4C11Q6IEV9 310 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 UBE3DQ7Z6J8 389 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 TRIM48Q8IWZ4 208 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 ADGRF3Q8IZF5 1079 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 EID3Q8N140 333 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 NATD1Q8N6N6 113 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 FAM47BQ8NA70 645 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 SARGQ9BW04 601 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 SLC6A16Q9GZN6 736 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 LHX9Q9NQ69 397 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 C2orf42Q9NWW7 574 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 TAAR2Q9P1P5 351 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 KLF15Q9UIH9 416 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 SAMD4AQ9UPU9 718 aaKnown RBP18.09■□□□□ 0.49
USP39-202ENST00000409025 AP1M2Q9Y6Q5 423 aa18.09■□□□□ 0.49
USP39-202ENST00000409025 PLXND1Q9Y4D7 1925 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 LRIT2A6NDA9 550 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 TBX19O60806 448 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 RASAL1O95294 804 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 NTRK1P04629 796 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 UBXN2BQ14CS0 331 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 PLCL1Q15111 1095 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 RGNQ15493 299 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 PTOV1Q86YD1 416 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 CLEC4FQ8N1N0 589 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 GPBAR1Q8TDU6 330 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 CNBD2Q96M20 576 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 SLC35A5Q9BS91 424 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 GSDMCQ9BYG8 508 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 DDX31Q9H8H2 851 aaKnown RBP18.08■□□□□ 0.49
USP39-202ENST00000409025 TAS2R9Q9NYW1 312 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms