RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ADPRMQ3LIE5 342 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 ABHD17CQ6PCB6 329 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 ZNF793Q6ZN11 406 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 NUDT13Q86X67 352 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 CMTM5Q96DZ9 223 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 PHOX2BQ99453 314 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 KCNH6Q9H252 994 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 IGHV5-10-1A0A0J9YXX1 117 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 LRP3O75074 770 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 ATXN8OSP0DMR3 200 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 BTN3A2P78410 334 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 VPS26BQ4G0F5 336 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 DEFB134Q4QY38 66 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 PHF19Q5T6S3 580 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 GALNT18Q6P9A2 607 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 PAGE2Q7Z2X7 111 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 PRSS42Q7Z5A4 293 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 ZNF655Q8N720 491 aaPredicted RBP20.15■□□□□ 0.82
CPNE1-204ENST00000397443 OR4D9Q8NGE8 314 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 VPS33AQ96AX1 596 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 METTL2AQ96IZ6 378 aaKnown RBP20.15■□□□□ 0.82
CPNE1-204ENST00000397443 CCDC74BQ96LY2 380 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 KCNC2Q96PR1 638 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 ZIM2Q9NZV7 527 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 PLCL2Q9UPR0 1127 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 SLC22A2O15244 555 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 FOLR1P15328 257 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 ACP1P24666 158 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 CERS1P27544 350 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 ADSLP30566 484 aaPredicted RBP20.15■□□□□ 0.82
CPNE1-204ENST00000397443 POLR2JP52435 117 aaKnown RBP20.15■□□□□ 0.82
CPNE1-204ENST00000397443 MAPK12P53778 367 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 TAS2R50P59544 299 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 ZNF763Q0D2J5 394 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 SPIDRQ14159 915 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 PARP9Q8IXQ6 854 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 UTP15Q8TED0 518 aaKnown RBP20.15■□□□□ 0.82
CPNE1-204ENST00000397443 RNF31Q96EP0 1072 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 NLNQ9BYT8 704 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 MRGBPQ9NV56 204 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 MCM8Q9UJA3 840 aa20.15■□□□□ 0.82
CPNE1-204ENST00000397443 TMEM150CB9EJG8 249 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ANKRD65E5RJM6 399 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 KLHL18O94889 574 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 IL1RNP18510 177 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 GABRA4P48169 554 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 DGKQP52824 942 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 SQSTM1Q13501 440 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ANKRD26P1Q6NSI1 321 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 PRSS41Q7RTY9 318 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 C16orf78Q8WTQ4 265 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 GAL3ST3Q96A11 431 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 SLC41A2Q96JW4 573 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 SPRTNQ9H040 489 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-204ENST00000397443 COPS7BQ9H9Q2 264 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-204ENST00000397443 PRDM7Q9NQW5 492 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ZNF860A6NHJ4 632 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 D6RAR5 112 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 TMPRSS11DO60235 418 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 SNRPB2P08579 225 aaKnown RBP20.14■□□□□ 0.81
CPNE1-204ENST00000397443 THRAP10827 490 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ACPPP15309 386 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 NELFEP18615 380 aaKnown RBP20.14■□□□□ 0.81
CPNE1-204ENST00000397443 CALB2P22676 271 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 JAK1P23458 1154 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ACADVLP49748 655 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 CLDN8P56748 225 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 KCNK10P57789 538 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 MXRA7P84157 204 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 MC1RQ01726 317 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 TIGD2Q4W5G0 525 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 MMP21Q8N119 569 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 CARFQ8N187 725 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 DTWD1Q8N5C7 304 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ACOT4Q8N9L9 421 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 FBXO27Q8NI29 283 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 RP9Q8TA86 221 aaKnown RBP20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ZBTB18Q99592 522 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 NPAS2Q99743 824 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ZNF768Q9H5H4 540 aaKnown RBP20.14■□□□□ 0.81
CPNE1-204ENST00000397443 TXLNGQ9NUQ3 528 aa20.14■□□□□ 0.81
CPNE1-204ENST00000397443 ZNF292O60281 2723 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 URADA6NGE7 173 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 AIM2O14862 343 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 ZSCAN9O15535 394 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 SRPX2O60687 465 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 CBFA2T3O75081 653 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 UNC5CO95185 931 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 IL3P08700 152 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 CAPN3P20807 821 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 HIST1H1TP22492 207 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 ATP5A1P25705 553 aaKnown RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 ZFP36L2P47974 494 aaKnown RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 TGM3Q08188 693 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 PGS1Q32NB8 556 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 FAM174BQ3ZCQ3 159 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 STPG1Q5TH74 334 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 BLOC1S3Q6QNY0 202 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 ABHD13Q7L211 337 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 B3GNT8Q7Z7M8 397 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms