RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GRIA3P42263 894 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 CAPZBP47756 277 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 MAPK10P53779 464 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 STX1BP61266 288 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 ERVK-8P63133 956 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 MAD2L1Q13257 205 aaPredicted RBP12.64□□□□□ -0.39
SEC13-209ENST00000397117 UBAP2LQ14157 1087 aaKnown RBP12.64□□□□□ -0.39
SEC13-209ENST00000397117 C16orf72Q14CZ0 275 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 C6orf136Q5SQH8 315 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 TRIM73Q86UV7 250 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 TTLQ8NG68 377 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 MARK4Q96L34 752 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 TWSG1Q9GZX9 223 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 LRTM1Q9HBL6 345 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 ARMCX1Q9P291 453 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 VPS29Q9UBQ0 182 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 SLC12A4Q9UP95 1085 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 KLHL20Q9Y2M5 609 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 TSC22D4Q9Y3Q8 395 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 A0A0J9YY10 115 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 TRBC2A0A5B9 178 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 MAGEB17A8MXT2 336 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 PRR35P0CG20 571 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 GPR3P46089 330 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 TLE1Q04724 770 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 RPS6KA2Q15349 733 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 OGFOD2Q6N063 350 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 IRGCQ6NXR0 463 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 CHSY3Q70JA7 882 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.395e-6■■■■■ 55.7
SEC13-209ENST00000397117 RNF175Q8N4F7 328 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 FLVCR1-AS1Q8TAF5 88 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 ZUFSPQ96AP4 578 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 ADNPQ9H2P0 1102 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 RHBGQ9H310 441 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 EPB41L1Q9H4G0 881 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 DMRT3Q9NQL9 472 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 ANKMY1Q9P2S6 941 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 POMT2Q9UKY4 750 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 EIF3LQ9Y262 564 aaKnown RBP12.63□□□□□ -0.39
SEC13-209ENST00000397117 CCL27Q9Y4X3 112 aa12.63□□□□□ -0.39
SEC13-209ENST00000397117 HAT1O14929 419 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 CCL4P13236 92 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 IDO1P14902 403 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 MAGP20916 626 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 PTX3P26022 381 aaPredicted RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 OR1D5P58170 312 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 RPS13P62277 151 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 RPL38P63173 70 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 IRX1P78414 480 aaPredicted RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 EMX2Q04743 252 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 SQLEQ14534 574 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 GSTA3Q16772 222 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 SMU1Q2TAY7 513 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 PHF19Q5T6S3 580 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ZNF425Q6IV72 752 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 FIGLAQ6QHK4 219 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ZNF438Q7Z4V0 828 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 LURAP1LQ8IV03 231 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 PLD3Q8IV08 490 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 CPSF7Q8N684 471 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 NCSTNQ92542 709 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 CMTM7Q96FZ5 175 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 SERPINI1Q99574 410 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 C1orf50Q9BV19 199 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 COPG1Q9Y678 874 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 DUX1O43812 170 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 SH3BGRLO75368 114 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 MYO1DO94832 1006 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 UBOX5O94941 541 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 TGFB1P01137 390 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 SERPIND1P05546 499 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ALDOCP09972 364 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 EZRP15311 586 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 CDH3P22223 829 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 PRPH2P23942 346 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 GSTM2P28161 218 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 MAPK1P28482 360 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 SCTRP47872 440 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ATP4BP51164 291 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 RPS15AP62244 130 aaKnown RBP12.62□□□□□ -0.39
SEC13-209ENST00000397117 GPLD1P80108 840 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 CACHD1Q5VU97 1274 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 PAQR7Q86WK9 346 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 MIER2Q8N344 545 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 ANKRD53Q8N9V6 530 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 NKD1Q969G9 470 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 CENPKQ9BS16 269 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 TUBB6Q9BUF5 446 aa12.62□□□□□ -0.39
SEC13-209ENST00000397117 CCDC106Q9BWC9 280 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms