RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TFR2Q9UP52 801 aa7.85□□□□□ -1.15
SCFD1-202ENST00000396629 JMJD1CQ15652 2540 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 TRBV11-1A0A0K0K1C0 115 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 GOLGA6L9A6NEM1 432 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 GOLGA6L19H0YKK7 550 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 B4GALT2O60909 372 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 TPM3P06753 285 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 MPC1LP0DKB6 136 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 CD53P19397 219 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 CHRM3P20309 590 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 UQCRC1P31930 480 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 SSR4P51571 173 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 KLF1Q13351 362 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 FBXL19-AS1Q494R0 122 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 NDUFAF5Q5TEU4 345 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 CAPN13Q6MZZ7 669 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 MFSD9Q8NBP5 474 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 RELL2Q8NC24 303 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 B3GNT7Q8NFL0 401 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 SLCO2A1Q92959 643 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 RNASE6Q93091 150 aaKnown RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 FAM136AQ96C01 138 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 COX4I2Q96KJ9 171 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 TCF12Q99081 682 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 PCBD2Q9H0N5 130 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 CLK4Q9HAZ1 481 aaKnown RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 NECTIN3Q9NQS3 549 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 ZNF223Q9UK11 482 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 PPIEQ9UNP9 301 aaKnown RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 SH2B3Q9UQQ2 575 aa7.84□□□□□ -1.15
SCFD1-202ENST00000396629 YARS2Q9Y2Z4 477 aaKnown RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 FBN1P35555 2871 aaKnown RBP7.84□□□□□ -1.15
SCFD1-202ENST00000396629 NCKAP5O14513 1909 aa7.84□□□□□ -1.16
SCFD1-202ENST00000396629 A8MUA0 341 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SUSD5O60279 629 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 GOSR1O95249 250 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SYF2O95926 243 aaKnown RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 TPM1P09493 284 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SLC35G6P0C7Q6 338 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ARNTP27540 789 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 NMBRP28336 390 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 STIP1P31948 543 aaKnown RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ASCL1P50553 236 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CLCN7P51798 805 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 DCAF7P61962 342 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 NKX6-1P78426 367 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 HYAL4Q2M3T9 481 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 RNF187Q5TA31 235 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 NIPAL1Q6NVV3 410 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CYHR1Q6ZMK1 362 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SDCCAG8Q86SQ7 713 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 FAM109AQ8N4B1 249 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 TMEM251Q8N6I4 163 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ZNF740Q8NDX6 193 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CALR3Q96L12 384 aaKnown RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SLC30A3Q99726 388 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 IL1RL2Q9HB29 575 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CCDC177Q9NQR7 707 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 KLHL42Q9P2K6 505 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 FBXW2Q9UKT8 454 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ERVK-11Q9UQG0 969 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 PCDHA13Q9Y5I0 950 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 A0A0G2JMM0 328 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 A0A1W2PPB8 328 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 A0A1W2PRS3 328 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 HSPB2A8KAH6 182 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 A8MVJ9 347 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 KIR3DP1A8MWS1 328 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 E7EVH7 732 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ZBTB14O43829 449 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 B3GALT4O96024 378 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 EPXP11678 715 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 GABRA1P14867 456 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ALOX12P18054 663 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 MAOAP21397 527 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CNR1P21554 472 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 TACR1P25103 407 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 PCSK6P29122 969 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 MAGEA5P43359 124 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 MAN2A2P49641 1150 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 GPR143P51810 404 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 TBPL1P62380 186 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SKP1P63208 163 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 OLR1P78380 273 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 TERF2Q15554 542 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 HSPB2Q16082 182 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 WLSQ5T9L3 541 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 MRNIPQ6NTE8 343 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CAVIN1Q6NZI2 390 aaKnown RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 C17orf64Q86WR6 236 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 CXorf67Q86X51 503 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-202ENST00000396629 VSTM4Q8IW00 320 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 PRELID2Q8N945 189 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 SARAFQ96BY9 339 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 LRRC46Q96FV0 321 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 VMP1Q96GC9 406 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 HPF1Q9NWY4 346 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 ZFATQ9P243 1243 aa7.83□□□□□ -1.16
SCFD1-202ENST00000396629 FOXD3Q9UJU5 478 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms