RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IQCHQ86VS3 1027 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PDSS2Q86YH6 399 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 MFSD9Q8NBP5 474 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 CATSPER1Q8NEC5 780 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR52E4Q8NGH9 312 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 GOT1L1Q8NHS2 421 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 FLVCR1-AS1Q8TAF5 88 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PPCDCQ96CD2 204 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 CAAP1Q9H8G2 361 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PRDM6Q9NQX0 595 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 NUP214P35658 2090 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 EML5Q05BV3 1969 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 A0A1W2PR77 199 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 ARHGAP10A1A4S6 786 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 EVPLLA8MZ36 301 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 CLIC1O00299 241 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 TBX19O60806 448 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 COQ9O75208 318 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 GMNNO75496 209 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 CPSF4O95639 269 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 ANXA6P08133 673 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 CELA2BP08218 269 aaPredicted RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 IL3P08700 152 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 GPX2P18283 190 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 CD38P28907 300 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 MAPK12P53778 367 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 MC1RQ01726 317 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 LRRC36Q1X8D7 754 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 TBCELQ5QJ74 424 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PRPF38BQ5VTL8 546 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZNF621Q6ZSS3 439 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 UBE3DQ7Z6J8 389 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 TAF8Q7Z7C8 310 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 SERPINA11Q86U17 422 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PAQR7Q86WK9 346 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 TICAM1Q8IUC6 712 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 MICU2Q8IYU8 434 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PAPD5Q8NDF8 572 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 TRPV3Q8NET8 790 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 FAM120BQ96EK7 910 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 REXO5Q96IC2 774 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 DDX31Q9H8H2 851 aaKnown RBP10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
SMARCAL1-203ENST00000392128 MYO15AQ9UKN7 3530 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 C1orf226A1L170 272 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 RTCAO00442 366 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 GSTA4O15217 222 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SCELO95171 688 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 WNT1P04628 370 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ENGP17813 658 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 PPIBP23284 216 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SOX11P35716 441 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 TRA2BP62995 288 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 KLC1Q07866 573 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 HYAL2Q12891 473 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 BIRC2Q13490 618 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR4C11Q6IEV9 310 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ERMP1Q7Z2K6 904 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 NAGSQ8N159 534 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 C10orf111Q8N326 155 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 PATE1Q8WXA2 126 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 TM4SF18Q96CE8 201 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZNF764Q96H86 408 aaPredicted RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR2A14Q96R47 310 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 LRRC61Q9BV99 259 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 AICDAQ9GZX7 198 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SPASTQ9UBP0 616 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZNF282Q9UDV7 671 aaPredicted RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 APOBEC3BQ9UH17 382 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ANAPC2Q9UJX6 822 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 TDRD6O60522 2096 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 MAP3K13O43283 966 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 TNFSF14O43557 240 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 GPR37L1O60883 481 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 HOXB3P14651 431 aaPredicted RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 JUNDP17535 347 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 DDCP20711 480 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 RPS15AP62244 130 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 RACK1P63244 317 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 RPL6Q02878 288 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SLC14A1Q13336 389 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 GRAMD1BQ3KR37 738 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SFT2D3Q587I9 215 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 RBM12BQ8IXT5 1001 aaKnown RBP10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 NATD1Q8N6N6 113 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SLC37A2Q8TED4 501 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 SPACA7Q96KW9 195 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 TBCDQ9BTW9 1192 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 MIEF1Q9NQG6 463 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ANKMY1Q9P2S6 941 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 VPS4AQ9UN37 437 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 CORO2BQ9UQ03 480 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 LRCH1Q9Y2L9 728 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 DTNAQ9Y4J8 743 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 ENTPD2Q9Y5L3 495 aa10.92□□□□□ -0.66
SMARCAL1-203ENST00000392128 A0A0A6YYD5 115 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms