RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 AGAP7PQ5VUJ5 663 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 JMJD6Q6NYC1 403 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 MED27Q6P2C8 311 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 TRIM40Q6P9F5 258 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 ADGRD1Q6QNK2 874 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 TIFABQ6ZNK6 161 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 KBTBD2Q8IY47 623 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 PLPP5Q8NEB5 264 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 SRFBP1Q8NEF9 429 aaKnown RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 OR2L5Q8NG80 312 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 CCT6BQ92526 530 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 PNPLA2Q96AD5 504 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 PEX11GQ96HA9 241 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 AGAP4Q96P64 663 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 ROGDIQ9GZN7 287 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 ZNF700Q9H0M5 742 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 EPN3Q9H201 632 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 EPS8L2Q9H6S3 715 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 PSMC3IPQ9P2W1 217 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 LRIT2A6NDA9 550 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 SYNDIG1LA6NDD5 238 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 MAGEB17A8MXT2 336 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 STX16-NPEPL1H3BU86 382 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 STX16O14662 325 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 ERI3O43414 337 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 CHST10O43529 356 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF500O60304 480 aaPredicted RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 UGDHO60701 494 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 SMIM24O75264 130 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 WFS1O76024 890 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 RNH1P13489 461 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 RAB8AP61006 207 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 RCN2Q14257 317 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 PCOLCEQ15113 449 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 LIPJQ5W064 366 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 GRHL2Q6ISB3 625 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 PARP9Q8IXQ6 854 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 LAS2Q8IYD9 372 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 PLD6Q8N2A8 252 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 LRRN4CLQ8ND94 238 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 ACMSDQ8TDX5 336 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 C8orf44Q96CB5 159 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 MS4A6EQ96DS6 147 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 THOC3Q96J01 351 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 SCYL1Q96KG9 808 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 REXO4Q9GZR2 422 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 MRPL46Q9H2W6 279 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 COPS7BQ9H9Q2 264 aaPredicted RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF160Q9HCG1 818 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 LANCL2Q9NS86 450 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 XPR1Q9UBH6 696 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 TSC22D4Q9Y3Q8 395 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 ASB1Q9Y576 335 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 KALRNO60229 2985 aa11.95□□□□□ -0.5
GGPS1-203ENST00000391855 SMG1Q96Q15 3661 aaKnown RBP11.95□□□□□ -0.5
GGPS1-203ENST00000391855 PRAMEF4O60810 478 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 JRKO75564 520 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 FAM153BP0C7A2 387 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 CD22P20273 847 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PHEXP78562 749 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 FOXK1P85037 733 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 RHAGQ02094 409 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 RAPSNQ13702 412 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 SLC29A2Q14542 456 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 FAM153CQ494X1 144 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 TMEM35AQ53FP2 167 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 CRB2Q5IJ48 1285 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PRAMEF9Q5VWM5 478 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 FAAH2Q6GMR7 532 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 IGFL2Q6UWQ7 119 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 QSOX2Q6ZRP7 698 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 CPEB2Q7Z5Q1 589 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ZADH2Q8N4Q0 377 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PTGR2Q8N8N7 351 aaPredicted RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 OR5T3Q8NGG3 340 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PPP4R1Q8TF05 950 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 REPS1Q96D71 796 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 MAGEB10Q96LZ2 347 aaPredicted RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 CENPKQ9BS16 269 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 MS4A8Q9BY19 250 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ACTR8Q9H981 624 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF490Q9ULM2 529 aaPredicted RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 MRPS33Q9Y291 106 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 MMACHCQ9Y4U1 282 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 B3GALT2O43825 422 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 SORBS2O94875 1100 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 WISP1O95388 367 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 PRR35P0CG20 571 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 GCAP28676 217 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 HNRNPH1P31943 449 aaKnown RBP11.94□□□□□ -0.5
GGPS1-203ENST00000391855 ARFIP1P53367 373 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 MTTPP55157 894 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 RAB38P57729 211 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 OLR1P78380 273 aa11.94□□□□□ -0.5
GGPS1-203ENST00000391855 MFAP5Q13361 173 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms