RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 I3L1I5 382 aaPredicted RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 RTCAO00442 366 aaKnown RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 DLGAP3O95886 979 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 HBQ1P09105 142 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 ITGAXP20702 1163 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 RORAP35398 523 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 BTKQ06187 659 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 ZNF385CQ66K41 422 aaPredicted RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 Q6ZSR9 355 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 ABHD13Q7L211 337 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 HOMEZQ8IX15 550 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 DDIASQ8IXT1 998 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 KIRREL3Q8IZU9 778 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 METTL27Q8N6F8 245 aaPredicted RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 OR9A4Q8NGU2 314 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 OR2T11Q8NH01 316 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 NXPE2Q96DL1 559 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 GBP5Q96PP8 586 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 C17orf62Q9BQA9 187 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 SORBS1Q9BX66 1292 aaKnown RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 MRPL1Q9BYD6 325 aaKnown RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 LHX9Q9NQ69 397 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 TXLNGQ9NUQ3 528 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 VPS29Q9UBQ0 182 aa17.84■□□□□ 0.45
SMN2-202ENST00000380742 A0A1B0GX78 115 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 SLC28A1O00337 649 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 PLPP1O14494 284 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 GALR3O60755 368 aaPredicted RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 EDF1O60869 148 aaKnown RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 SEMA3DO95025 777 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 TBL3Q12788 808 aaKnown RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 HERC3Q15034 1050 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 DEFB134Q4QY38 66 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 XKR7Q5GH72 579 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 TRIM40Q6P9F5 258 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 TIPARPQ7Z3E1 657 aaKnown RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 WDR75Q8IWA0 830 aaKnown RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 DSELQ8IZU8 1212 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 AMER3Q8N944 861 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 GALNT6Q8NCL4 622 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 RGMAQ96B86 450 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 FAR2Q96K12 515 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 LRFN5Q96NI6 719 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 QRFPRQ96P65 431 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 ZNF717Q9BY31 904 aaPredicted RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 NUF2Q9BZD4 464 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 AKIRIN1Q9H9L7 192 aaPredicted RBP17.83■□□□□ 0.45
SMN2-202ENST00000380742 ANKHQ9HCJ1 492 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 NAALAD2Q9Y3Q0 740 aa17.83■□□□□ 0.45
SMN2-202ENST00000380742 SGK494L7N484 410 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 MEN1O00255 615 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 ZNF195O14628 629 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 DNAJB6O75190 326 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 KLHL18O94889 574 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 NSA2O95478 260 aaKnown RBP17.82■□□□□ 0.44
SMN2-202ENST00000380742 OR1D4P47884 311 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 RAP1GDS1P52306 607 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 BTN3A2P78410 334 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 IMPG1Q17R60 797 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 OR4C11Q6IEV9 310 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 ZNF793Q6ZN11 406 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 ZFAND4Q86XD8 727 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 SHISA5Q8N114 240 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 METTL4Q8N3J2 472 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 SRFBP1Q8NEF9 429 aaKnown RBP17.82■□□□□ 0.44
SMN2-202ENST00000380742 PROKR1Q8TCW9 393 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 C19orf60Q96EN9 201 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 MVB12AQ96EY5 273 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 MMABQ96EY8 250 aaPredicted RBP17.82■□□□□ 0.44
SMN2-202ENST00000380742 APIPQ96GX9 242 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 PPP1R36Q96LQ0 422 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 KCNC2Q96PR1 638 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 TBCDQ9BTW9 1192 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 NMRK1Q9NWW6 199 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 MAU2Q9Y6X3 613 aa17.82■□□□□ 0.44
SMN2-202ENST00000380742 ATP6AP2A0A1C7CYW4 349 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 ZNF860A6NHJ4 632 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 HDAC3O15379 428 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 RGS14O43566 566 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 ATP6AP2O75787 350 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 PRPH2P23942 346 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 BSGP35613 385 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 ARFIP1P53367 373 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 TGM3Q08188 693 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 VWA5B1Q5TIE3 1220 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 NUP210LQ5VU65 1888 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 LCN10Q6JVE6 187 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 MAVSQ7Z434 540 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 CHTF18Q8WVB6 975 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 ZNF317Q96PQ6 595 aaPredicted RBP17.81■□□□□ 0.44
SMN2-202ENST00000380742 CCT7Q99832 543 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 THSD1Q9NS62 852 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 SLC22A11Q9NSA0 550 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 VTI1BQ9UEU0 232 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 GIMAP2Q9UG22 337 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 USH1CQ9Y6N9 552 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 CACNA1AO00555 2505 aa17.81■□□□□ 0.44
SMN2-202ENST00000380742 MED19A0JLT2 244 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms