RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 VSX2P58304 361 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 IRF9Q00978 393 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 LIPEQ05469 1076 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 TAF1AQ15573 450 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 VPS26BQ4G0F5 336 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 LRRC66Q68CR7 880 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 AFTPHQ6ULP2 937 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PRSS58Q8IYP2 241 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 L3MBTL4Q8NA19 623 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF248Q8NDW4 579 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SPPL2BQ8TCT7 592 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 DIRAS2Q96HU8 199 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 ERMAPQ96PL5 475 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 FRMD8P1Q9BZ68 369 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 BARHL1Q9BZE3 327 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 EMC7Q9NPA0 242 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 RASSF1Q9NS23 344 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 A0A096LPK6 155 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ARHGEF33A8MVX0 844 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 PPP6CO00743 305 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 RHCEP18577 417 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 OR1G1P47890 313 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 RGS19P49795 217 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 CCDC85BQ15834 202 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 EXOC3L2Q2M3D2 409 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MINDY4Q4G0A6 757 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 FBXO48Q5FWF7 155 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 RABL3Q5HYI8 236 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 HECTD3Q5T447 861 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 TDRD10Q5VZ19 366 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 SLC34A3Q8N130 599 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 OR10H5Q8NGA6 315 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 DCAF4Q8WV16 495 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 OTULINQ96BN8 352 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MRPS24Q96EL2 167 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 SPACA7Q96KW9 195 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ACE2Q9BYF1 805 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 GPR61Q9BZJ8 451 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MUC13Q9H3R2 512 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 DDX31Q9H8H2 851 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 FOLH1BQ9HBA9 442 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 APOBEC3GQ9HC16 384 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MIOSQ9NXC5 875 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 FBXO10Q9UK96 956 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 SLC16A6O15403 523 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 RAB3DO95716 219 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ATP6V1E1P36543 226 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MAN2A2P49641 1150 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 NR0B1P51843 470 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 CXCR4P61073 352 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 PIGHQ14442 188 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 PROX2Q3B8N5 592 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 FAM98BQ52LJ0 330 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 FRMPD2BQ6IN97 320 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 HIPK1Q86Z02 1210 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MINDY1Q8N5J2 469 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 NETO2Q8NC67 525 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 R3HDMLQ9H3Y0 253 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 OLA1Q9NTK5 396 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MARK1Q9P0L2 795 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 EIF2B4Q9UI10 523 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 SAMHD1Q9Y3Z3 626 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 A0A096LPI6 279 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 A0A0J9YYE9 177 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 M0QYV0 167 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ANKRD28O15084 1053 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 OIP5O43482 229 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 TOXO94900 526 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 CST1P01037 141 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 OR56A5P0C7T3 313 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 STOMP27105 288 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 C21orf33P30042 268 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 INPP1P49441 399 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 WNT7BP56706 349 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 UGCGQ16739 394 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 MICBQ29980 383 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 KLHL22Q53GT1 634 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 LRRC38Q5VT99 294 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 LIPNQ5VXI9 398 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 TCEAL6Q6IPX3 200 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 GCNT7Q6ZNI0 430 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 RNF130Q86XS8 419 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 CBLN2Q8IUK8 224 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 RIMKLAQ8IXN7 391 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 CENPLQ8N0S6 344 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 FTMTQ8N4E7 242 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 LPCAT1Q8NF37 534 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ZBTB45Q96K62 511 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 POLR1EQ9GZS1 481 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 IL22Q9GZX6 179 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 TASP1Q9H6P5 420 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 ELAC1Q9H777 363 aaKnown RBP9.03□□□□□ -0.96
PTPRA-204ENST00000380393 SEBOXQ9HB31 216 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms