RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PTBP2Q9UKA9 531 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 A8MU76 341 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 HIST1H2ABP04908 130 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 TSPAN19P0C672 248 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 MMP12P39900 470 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 CDK9P50750 372 aaKnown RBP13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 ID2Q02363 134 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 DEFB134Q4QY38 66 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 HIST3H2AQ7L7L0 130 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 CCDC116Q8IYX3 515 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 CADM2Q8N3J6 435 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 OR8J3Q8NGG0 315 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 HIST1H2ACQ93077 130 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 APOOQ9BUR5 198 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 TMEM27Q9HBJ8 222 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 A0A096LPI6 279 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 NME4O00746 187 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 NME6O75414 186 aaPredicted RBP13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 SAGP10523 405 aaPredicted RBP13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 PIGGQ5H8A4 983 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 FAM91A1Q658Y4 838 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 COMMD6Q7Z4G1 85 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF480Q8WV37 535 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 PYURFQ96I23 114 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 APOBEC3BQ9UH17 382 aaKnown RBP13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 SCML1Q9UN30 329 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 TRBC2A0A5B9 178 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 PRRT4C9JH25 899 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 E2F3O00716 465 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 B4GALT2O60909 372 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 SCN2BO60939 215 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 PRKACGP22612 351 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 PRLHRP49683 370 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 MS4A2Q01362 244 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 ACVR1Q04771 509 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 CROCCP3Q8IVE0 287 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 POC5Q8NA72 575 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 GPATCH1Q9BRR8 931 aaKnown RBP13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 IL21RQ9HBE5 538 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 AMBNQ9NP70 447 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 P2RX2Q9UBL9 471 aa13.64□□□□□ -0.23
SHROOM1-203ENST00000378679 HOXC11O43248 304 aaPredicted RBP13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 CCNB2O95067 398 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 THEGLP0DJG4 465 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 LAMP1P11279 417 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 MAGEA12P43365 314 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 AVPR1BP47901 424 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 LAPTM4AQ15012 233 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 DUSP6Q16828 381 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GTDC1Q4AE62 458 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 PARM1Q6UWI2 310 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 Q6ZNB5 142 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 RLN3Q8WXF3 142 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 NTMT1Q9BV86 223 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 MARCH7Q9H992 704 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 CCNB1IP1Q9NPC3 277 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 PRDM8Q9NQV8 689 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 CBFA2T3O75081 653 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GPX3P22352 226 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GK3PQ14409 553 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF423Q2M1K9 1284 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 KLHL12Q53G59 568 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 TMEM31Q5JXX7 168 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.63□□□□□ -0.232e-9■■□□□ 12.2
SHROOM1-203ENST00000378679 IRAK1BP1Q5VVH5 260 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 SBSNQ6UWP8 590 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ADIPOR2Q86V24 386 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GKN2Q86XP6 184 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 CLECL1Q8IZS7 167 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 METTL21AQ8WXB1 218 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 CAMK1GQ96NX5 476 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GPR78Q96P69 363 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 PHF11Q9UIL8 331 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 CENPFP49454 3210 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 TMEM150CB9EJG8 249 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 DBTP11182 482 aaKnown RBP13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ITGB8P26012 769 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ABATP80404 500 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 TOMM20Q15388 145 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 MED22Q15528 200 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GPR68Q15743 365 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 SNAPC1Q16533 368 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ATG9BQ674R7 924 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GRHL2Q6ISB3 625 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 ANKRD54Q6NXT1 300 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 AVL9Q8NBF6 648 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 HSH2DQ96JZ2 352 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 TIMMDC1Q9NPL8 285 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GPRC5BQ9NZH0 403 aa13.63□□□□□ -0.23
SHROOM1-203ENST00000378679 GPR34Q9UPC5 381 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms