RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 AGAP7PQ5VUJ5 663 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 FCRL6Q6DN72 434 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 FRMD7Q6ZUT3 714 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 OVCH1Q7RTY7 1134 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
PRPF18-202ENST00000378572 CPLX4Q7Z7G2 160 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 CUZD1Q86UP6 607 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 KIRREL3Q8IZU9 778 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 MAGEC3Q8TD91 643 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 PPP4R1Q8TF05 950 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 AGAP4Q96P64 663 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 CRB3Q9BUF7 120 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 YIPF2Q9BWQ6 316 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 EPS8L2Q9H6S3 715 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 WDR54Q9H977 334 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 UTP6Q9NYH9 597 aaKnown RBP13.07□□□□□ -0.32
PRPF18-202ENST00000378572 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
PRPF18-202ENST00000378572 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 NUP210LQ5VU65 1888 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 ITM2AO43736 263 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 C1orf105O95561 183 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 ITGAXP20702 1163 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 COL8A1P27658 744 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 GGT5P36269 586 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 CDC16Q13042 620 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 UNC50Q53HI1 259 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 YOD1Q5VVQ6 348 aaPredicted RBP13.06□□□□□ -0.32
PRPF18-202ENST00000378572 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 CRLF3Q8IUI8 442 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 CCNYL1Q8N7R7 359 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 CCDC138Q96M89 665 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 SORT1Q99523 831 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 EGFL8Q99944 293 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 C20orf27Q9GZN8 174 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 GSTO2Q9H4Y5 243 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 ARL15Q9NXU5 204 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 HS3ST3B1Q9Y662 390 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 NOTCH2Q04721 2471 aa13.06□□□□□ -0.32
PRPF18-202ENST00000378572 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 NCF1BA6NI72 391 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 NCF1CA8MVU1 366 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 SUPT7LO94864 414 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 CBX6O95503 412 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 HSPA4LO95757 839 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ALBP02768 609 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 NCF1P14598 390 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 EEF1DP29692 281 aaKnown RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ARRB2P32121 409 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 OCA2Q04671 838 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 GRB7Q14451 532 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 FAM214AQ32MH5 1076 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 WASHC2DQ5SRD0 308 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ZNF787Q6DD87 383 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 LINC00696Q6ZRV3 163 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 Q6ZS92 163 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 COX15Q7KZN9 410 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 DNAJB14Q8TBM8 379 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ZNF483Q8TF39 744 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ATL1Q8WXF7 558 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 FBXL8Q96CD0 374 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 THOC3Q96J01 351 aaKnown RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 SPSB2Q99619 263 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 MENTQ9BUN1 341 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ACAT2Q9BWD1 397 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 SEMA3GQ9NS98 782 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 RAP2CQ9Y3L5 183 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 CSAG2Q9Y5P2 127 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 HIVEP3Q5T1R4 2406 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 NBPF19A0A087WUL8 3843 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 HYKKA2RU49 373 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 MYO1CO00159 1063 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 SOCS6O14544 535 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 TAPBPO15533 448 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 SIX3O95343 332 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 GUCA1CO95843 209 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 FBLP22087 321 aaKnown RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 HK2P52789 917 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 CCSMST1Q4G0I0 132 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ARL13AQ5H913 290 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 CGB2Q6NT52 195 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 PIGWQ7Z7B1 504 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 KLHDC8AQ8IYD2 350 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 DTWD1Q8N5C7 304 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 MIEF2Q96C03 454 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 MAGEB10Q96LZ2 347 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 SIKE1Q9BRV8 207 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 TMEM79Q9BSE2 394 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 LHPPQ9H008 270 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 EML4Q9HC35 981 aaKnown RBP13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ZNF304Q9HCX3 659 aa13.05□□□□□ -0.32
PRPF18-202ENST00000378572 ABCF3Q9NUQ8 709 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms