RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 COL6A2P12110 1019 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 AGTR2P50052 363 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 SKP1P63208 163 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 DOC2AQ14183 400 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 NAA30Q147X3 362 aaPredicted RBP16.04■□□□□ 0.16
RER1-202ENST00000378512 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 PLEKHN1Q494U1 663 aaPredicted RBP16.04■□□□□ 0.16
RER1-202ENST00000378512 FAM153CQ494X1 144 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 DEFB134Q4QY38 66 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 TECRLQ5HYJ1 363 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 METTL2BQ6P1Q9 378 aaKnown RBP16.04■□□□□ 0.16
RER1-202ENST00000378512 KRT78Q8N1N4 520 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 PLPP5Q8NEB5 264 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 OR5T3Q8NGG3 340 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 EFCAB11Q9BUY7 163 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 YIPF2Q9BWQ6 316 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 LHPPQ9H008 270 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 ZNF700Q9H0M5 742 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 KLHL31Q9H511 634 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 HCN3Q9P1Z3 774 aa16.04■□□□□ 0.16
RER1-202ENST00000378512 LRIT2A6NDA9 550 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 SUPT3HB4E1H0 165 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 DNAJB6O75190 326 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 SUPT3HO75486 399 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 S100BP04271 92 aaPredicted RBP16.03■□□□□ 0.16
RER1-202ENST00000378512 MSH2P43246 934 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 ALDH18A1P54886 795 aaKnown RBP16.03■□□□□ 0.16
RER1-202ENST00000378512 RHAGQ02094 409 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 PCOLCEQ15113 449 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 RBBP5Q15291 538 aaKnown RBP16.03■□□□□ 0.16
RER1-202ENST00000378512 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 TAOK1Q7L7X3 1001 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 PSMF1Q92530 271 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 EXT2Q93063 718 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 GAL3ST3Q96A11 431 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 MS4A6EQ96DS6 147 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 IMMP1LQ96LU5 166 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 SLAMF7Q9NQ25 335 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 MAP10Q9P2G4 905 aa16.03■□□□□ 0.16
RER1-202ENST00000378512 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 CHST10O43529 356 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 CCNT2O60583 730 aaKnown RBP16.02■□□□□ 0.16
RER1-202ENST00000378512 B3GALT4O96024 378 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 ALPPP05187 535 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 SERPIND1P05546 499 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 C8orf89P0DMQ9 161 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 MYBL2P10244 700 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 ITGA3P26006 1051 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 TNFRSF8P28908 595 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 HNRNPH1P31943 449 aaKnown RBP16.02■□□□□ 0.16
RER1-202ENST00000378512 GLRBP48167 497 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 STXBP1P61764 594 aaKnown RBP16.02■□□□□ 0.16
RER1-202ENST00000378512 LAPTM5Q13571 262 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.163e-9■■■■■ 79.9
RER1-202ENST00000378512 EIF2S3LQ2VIR3 472 aaKnown RBP16.02■□□□□ 0.16
RER1-202ENST00000378512 XKR6Q5GH73 641 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 KLC3Q6P597 504 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 TIFABQ6ZNK6 161 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 LAS2Q8IYD9 372 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 PNPLA2Q96AD5 504 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 ZNF160Q9HCG1 818 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 RIC8BQ9NVN3 520 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 ZNF358Q9NW07 568 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 OPTCQ9UBM4 332 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 TSC22D4Q9Y3Q8 395 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 CSAG2Q9Y5P2 127 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 IKBKGQ9Y6K9 419 aa16.02■□□□□ 0.16
RER1-202ENST00000378512 SPTAN1Q13813 2472 aaKnown RBP16.02■□□□□ 0.16
RER1-202ENST00000378512 NSG1A0A0A6YYJ2 146 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 EXOC1LA0A1B0GW35 172 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 ZNF860A6NHJ4 632 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 TRIM49D1C9J1S8 452 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 AGFG2O95081 481 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 SNRPAP09012 282 aaKnown RBP16.02■□□□□ 0.15
RER1-202ENST00000378512 RAB8AP61006 207 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 CHIT1Q13231 466 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 PAGE2BQ5JRK9 111 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 ADNP2Q6IQ32 1131 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 RIPOR1Q6ZS17 1223 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 PARP9Q8IXQ6 854 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 TMEM151AQ8N4L1 468 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 SNX31Q8N9S9 440 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 UHMK1Q8TAS1 419 aaKnown RBP16.02■□□□□ 0.15
RER1-202ENST00000378512 TBC1D20Q96BZ9 403 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 SNRNP40Q96DI7 357 aaKnown RBP16.02■□□□□ 0.15
RER1-202ENST00000378512 PEX11GQ96HA9 241 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 QRFPRQ96P65 431 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 WDR77Q9BQA1 342 aaPredicted RBP16.02■□□□□ 0.15
RER1-202ENST00000378512 VPS11Q9H270 941 aa16.02■□□□□ 0.15
RER1-202ENST00000378512 CNTRLQ7Z7A1 2325 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 ANKDD1BA6NHY2 528 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 MAGEB17A8MXT2 336 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 SERPINA7P05543 415 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 FHP07954 510 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 RBP1P09455 135 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 PRR35P0CG20 571 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 EPB42P16452 691 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 SOX11P35716 441 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 IRF8Q02556 426 aa16.01■□□□□ 0.15
RER1-202ENST00000378512 EEF1A2Q05639 463 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms