RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 C2orf74A8MZ97 194 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 SCN2BO60939 215 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
TCOF1-202ENST00000377797 CCNA2P20248 432 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 HRH2P25021 359 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 CYBRD1Q53TN4 286 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 LILRA6Q6PI73 481 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 SH2D5Q6ZV89 423 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 SLC34A3Q8N130 599 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 OR2L2Q8NH16 312 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-202ENST00000377797 ACPTQ9BZG2 426 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 DMTF1Q9Y222 760 aa13.95□□□□□ -0.18
TCOF1-202ENST00000377797 SLC25A12O75746 678 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 KDELR2P33947 212 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 ID2Q02363 134 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 LAPTM4AQ15012 233 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 GPR68Q15743 365 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 DUSP6Q16828 381 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 C5orf22Q49AR2 442 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 IRAK1BP1Q5VVH5 260 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 KCNJ13O60928 360 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 SLAMF1Q13291 335 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 RCAN2Q14206 197 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 IRF4Q15306 451 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 ELOCQ15369 112 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 ANKRD54Q6NXT1 300 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 AMBNQ9NP70 447 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 PRDM8Q9NQV8 689 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 CMTM6Q9NX76 183 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 B4GALT2O60909 372 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 THEGLP0DJG4 465 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 TARDBPQ13148 414 aaKnown RBP eCLIP13.94□□□□□ -0.18
TCOF1-202ENST00000377797 RANBP3LQ86VV4 465 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-202ENST00000377797 KCNC2Q96PR1 638 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 NUAK2Q9H093 628 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 POLR2J3Q9H1A7 115 aaKnown RBP13.94□□□□□ -0.18
TCOF1-202ENST00000377797 IL21RQ9HBE5 538 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 A8MU76 341 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 PRRT4C9JH25 899 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 H3BNX3 289 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 ALOX5P09917 674 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 PBX2P40425 430 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 REEP3Q6NUK4 255 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 ASPGQ86U10 573 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 TOR4AQ9NXH8 423 aa13.94□□□□□ -0.18
TCOF1-202ENST00000377797 UBFD1O14562 309 aaKnown RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ARHGEF15O94989 841 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 SDC1P18827 310 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 FPR1P21462 350 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 JAK1P23458 1154 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 TOMM20Q15388 145 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 POMZP3Q6PJE2 187 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 OR5P2Q8WZ92 322 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ZHX1-C8orf76Q96EF9 292 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 DPH2Q9BQC3 489 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 C1orf105O95561 183 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 MTHFD2P13995 350 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 SEPHS1P49903 392 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 CDKL1Q00532 357 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 CHMP1BQ7LBR1 199 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ADGRD2Q7Z7M1 963 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 LMNTD1Q8N9Z9 388 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 EFCAB10A6NFE3 127 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 PXNP49023 591 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 VSX2P58304 361 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF33BQ06732 778 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ZZZ3Q8IYH5 903 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 AMER2Q8N7J2 671 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 OR56A1Q8NGH5 318 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 PIGXQ8TBF5 258 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 LMAN1LQ9HAT1 526 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 THAP10Q9P2Z0 257 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 KRT8P05787 483 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 DBTP11182 482 aaKnown RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 KHDRBS2Q5VWX1 349 aaKnown RBP13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ALG1LQ6GMV1 187 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 PARM1Q6UWI2 310 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 TMC8Q8IU68 726 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 OR8K5Q8NH50 307 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 EGLN2Q96KS0 407 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 CXorf21Q9HAI6 301 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 SMURF2Q9HAU4 748 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 ACSL6Q9UKU0 697 aa13.93□□□□□ -0.18
TCOF1-202ENST00000377797 SCAMP2O15127 329 aaKnown RBP13.92□□□□□ -0.18
TCOF1-202ENST00000377797 OR6B1O95007 311 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 MED26O95402 600 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 CLIC3O95833 236 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 TPP2P29144 1249 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-202ENST00000377797 ALDH3A2P51648 485 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 RPS6KA3P51812 740 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 DCDC1P59894 354 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 CTC1Q2NKJ3 1217 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 SMU1Q2TAY7 513 aa13.92□□□□□ -0.18
TCOF1-202ENST00000377797 SATL1Q86VE3 508 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms