RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CTNNAL1Q9UBT7 734 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 SH3BGRL2Q9UJC5 107 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 OARD1Q9Y530 152 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 DIDO1Q9BTC0 2240 aaKnown RBP19.75■□□□□ 0.75
VSX1-201ENST00000376707 ARHGAP10A1A4S6 786 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 FAM227AF5H4B4 570 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 HNRNPRO43390 633 aaKnown RBP19.74■□□□□ 0.75
VSX1-201ENST00000376707 RAD51CO43502 376 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 RNH1P13489 461 aaKnown RBP19.74■□□□□ 0.75
VSX1-201ENST00000376707 CA7P43166 264 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 CASP6P55212 293 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 SP5Q6BEB4 398 aaPredicted RBP19.74■□□□□ 0.75
VSX1-201ENST00000376707 MTFR2Q6P444 385 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 QSOX2Q6ZRP7 698 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 CYS1Q717R9 158 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 ADAMTSL2Q86TH1 951 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 RPS19BP1Q86WX3 136 aaKnown RBP19.74■□□□□ 0.75
VSX1-201ENST00000376707 ELP5Q8TE02 316 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 PYROXD1Q8WU10 500 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 SCMH1Q96GD3 660 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 KLHL31Q9H511 634 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 POPDC3Q9HBV1 291 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 SMYD2Q9NRG4 433 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 GRHL1Q9NZI5 618 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
VSX1-201ENST00000376707 CENPEQ02224 2701 aa19.74■□□□□ 0.75
VSX1-201ENST00000376707 CTAGE15A4D2H0 777 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 SLC19A2O60779 497 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 WDR47O94967 919 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 WISP3O95389 354 aaPredicted RBP19.73■□□□□ 0.75
VSX1-201ENST00000376707 SERPINA6P08185 405 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 MAOAP21397 527 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 SLC12A2P55011 1212 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 ETF1P62495 437 aaKnown RBP19.73■□□□□ 0.75
VSX1-201ENST00000376707 BTG2P78543 158 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 ALDH6A1Q02252 535 aaKnown RBP19.73■□□□□ 0.75
VSX1-201ENST00000376707 HYAL2Q12891 473 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 TSNQ15631 228 aaKnown RBP19.73■□□□□ 0.75
VSX1-201ENST00000376707 TOR1AIP1Q5JTV8 583 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 CTAGE6Q86UF2 777 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 TICAM1Q8IUC6 712 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 CEP97Q8IW35 865 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 KIF2BQ8N4N8 673 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 FAM98AQ8NCA5 519 aaKnown RBP19.73■□□□□ 0.75
VSX1-201ENST00000376707 ARMC2Q8NEN0 867 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 ANKRD49Q8WVL7 239 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 MARVELD3Q96A59 401 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 CCDC120Q96HB5 630 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 DPH5Q9H2P9 285 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 GPAMQ9HCL2 828 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 PRDM9Q9NQV7 894 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 LRFN1Q9P244 771 aa19.73■□□□□ 0.75
VSX1-201ENST00000376707 H2AFYO75367 372 aaKnown RBP19.72■□□□□ 0.75
VSX1-201ENST00000376707 SP1P08047 785 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 GNAZP19086 355 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 SSTR1P30872 391 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 STXBP1P61764 594 aaKnown RBP19.72■□□□□ 0.75
VSX1-201ENST00000376707 ART3Q13508 389 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 CAPN12Q6ZSI9 719 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 GALNTL5Q7Z4T8 443 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 CREB3L4Q8TEY5 395 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 ITLN2Q8WWU7 325 aaPredicted RBP19.72■□□□□ 0.75
VSX1-201ENST00000376707 MAGED4Q96JG8 741 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 SCN2AQ99250 2005 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 PHACTR1Q9C0D0 580 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 SAYSD1Q9NPB0 183 aa19.72■□□□□ 0.75
VSX1-201ENST00000376707 CACNA1DQ01668 2161 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 ITPR2Q14571 2701 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 TCRBV16S1A1N1A0A5B0 115 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 ASPDHA6ND91 283 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 SAGE2PA6NJ88 616 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 CDK2AP1O14519 115 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 NEURL1O76050 574 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 WISP2O76076 250 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 SMIM10L1P0DMW3 83 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 C1GALT1C1LP0DN25 315 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 CASQ1P31415 396 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 GDF5P43026 501 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 POU4F1Q01851 419 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 C2orf54Q08AI8 447 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 KRTCAP3Q53RY4 240 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 SLC25A25Q6KCM7 469 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 RPTNQ6XPR3 784 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 ZNF572Q7Z3I7 529 aaPredicted RBP19.71■□□□□ 0.75
VSX1-201ENST00000376707 MRGPRGQ86SM5 289 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 CA13Q8N1Q1 262 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 THAP3Q8WTV1 239 aaPredicted RBP19.71■□□□□ 0.75
VSX1-201ENST00000376707 SMIM10Q96HG1 83 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 FAR2Q96K12 515 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 GPR137Q96N19 417 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 FRMD6Q96NE9 622 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 TSPAN10Q9H1Z9 355 aaPredicted RBP19.71■□□□□ 0.75
VSX1-201ENST00000376707 CELSR2Q9HCU4 2923 aa19.71■□□□□ 0.75
VSX1-201ENST00000376707 MYO9AB2RTY4 2548 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 IGKV3D-11A0A0A0MRZ8 115 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 TCRBV9S1A1TA0A576 114 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 NCF1BA6NI72 391 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 ENO4A6NNW6 628 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 A8MUA0 341 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 NCF1CA8MVU1 366 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms