RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SPESP1Q6UW49 350 aa14.92□□□□□ -0.02
CCDC40-202ENST00000374876 CLVS1Q8IUQ0 354 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-202ENST00000374876 NRSN1Q8IZ57 195 aa14.92□□□□□ -0.02
CCDC40-202ENST00000374876 ZCCHC7Q8N3Z6 543 aaKnown RBP14.92□□□□□ -0.02
CCDC40-202ENST00000374876 LILRA3Q8N6C8 439 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-202ENST00000374876 PYURFQ96I23 114 aa14.92□□□□□ -0.02
CCDC40-202ENST00000374876 OSBPL10Q9BXB5 764 aa14.92□□□□□ -0.02
CCDC40-202ENST00000374876 NPLQ9BXD5 320 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-202ENST00000374876 RXFP3Q9NSD7 469 aa14.92□□□□□ -0.02
CCDC40-202ENST00000374876 SUSD2Q9UGT4 822 aa14.92□□□□□ -0.02
CCDC40-202ENST00000374876 PTPRZ1P23471 2315 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-202ENST00000374876 A0A1B0GVT2 93 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 SLC5A10A0PJK1 596 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 POM121BA6NF01 834 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 H0YIV9 168 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 KHNYNO15037 678 aaKnown RBP14.91□□□□□ -0.02
CCDC40-202ENST00000374876 SLC16A8O95907 504 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 CD38P28907 300 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 PLA2G5P39877 138 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 YAP1P46937 504 aaKnown RBP14.91□□□□□ -0.02
CCDC40-202ENST00000374876 HLCSP50747 726 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 AFF3P51826 1226 aaKnown RBP14.91□□□□□ -0.02
CCDC40-202ENST00000374876 UGT8Q16880 541 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 AP1ARQ63HQ0 302 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 SLC23A3Q6PIS1 610 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 SERPINA11Q86U17 422 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 TMEM145Q8NBT3 493 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 ZNF555Q8NEP9 628 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 PNPT1Q8TCS8 783 aaKnown RBP14.91□□□□□ -0.02
CCDC40-202ENST00000374876 BMFQ96LC9 184 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 PKP4Q99569 1192 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 IFT80Q9P2H3 777 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-202ENST00000374876 ADAMTS9Q9P2N4 1935 aa14.91□□□□□ -0.02
CCDC40-202ENST00000374876 NOBOXO60393 691 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 CCNDBP1O95273 360 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 HSD3B1P14060 373 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 EEF1B2P24534 225 aaKnown RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 HSD3B2P26439 372 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ELK4P28324 431 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 AKT2P31751 481 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 HOXD12P35452 270 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 TPD52P55327 224 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 PPP2R2BQ00005 443 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 CSRP2Q16527 193 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 WSCD2Q2TBF2 565 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ZNF621Q6ZSS3 439 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 KCTD8Q6ZWB6 473 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 THAP5Q7Z6K1 395 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 HS3ST5Q8IZT8 346 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 C8orf59Q8N0T1 100 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 OR5K1Q8NHB7 308 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 CEP76Q8TAP6 659 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 STARD8Q92502 1023 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 COQ10AQ96MF6 247 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 OR4K3Q96R72 315 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 POLR1BQ9H9Y6 1135 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 BRF2Q9HAW0 419 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 CAPN10Q9HC96 672 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 TIMMDC1Q9NPL8 285 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 FAM118AQ9NWS6 357 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 FAM120CQ9NX05 1096 aaKnown RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 USE1Q9NZ43 259 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 SLC6A14Q9UN76 642 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 SAMD4AQ9UPU9 718 aaKnown RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 FAM186AA6NE01 2351 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 A0A1W2PR77 199 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 MAGEB17A8MXT2 336 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 H3BM21 787 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 PSMD11O00231 422 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 CLIC1O00299 241 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ZNF682O95780 498 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ENGP17813 658 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 IMPA1P29218 277 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 PDHA2P29803 388 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 TTKP33981 857 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 SHMT2P34897 504 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 BNC1Q01954 994 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 SLC14A1Q13336 389 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 LRRC23Q53EV4 343 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 PRAMEF14Q5SWL7 426 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ZCCHC8Q6NZY4 707 aaKnown RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 KLHDC8AQ8IYD2 350 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 TP53I13Q8NBR0 393 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 PLA2G15Q8NCC3 412 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 OR8J2Q8NGG1 315 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 OR2I1PQ8NGU4 316 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 OR56A3Q8NH54 315 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ISOC1Q96CN7 298 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 METTL2AQ96IZ6 378 aaKnown RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 LIN28AQ9H9Z2 209 aaKnown RBP14.9□□□□□ -0.02
CCDC40-202ENST00000374876 CXorf21Q9HAI6 301 aa14.9□□□□□ -0.02
CCDC40-202ENST00000374876 ZNF701M0R085 212 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-202ENST00000374876 HS6ST1O60243 411 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 CPSF4O95639 269 aaKnown RBP14.89□□□□□ -0.03
CCDC40-202ENST00000374876 NUDT1P36639 197 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 DCTP40126 519 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 PPP1R8Q12972 351 aaKnown RBP14.89□□□□□ -0.03
CCDC40-202ENST00000374876 PMS2P3Q13401 168 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 SPIDRQ14159 915 aa14.89□□□□□ -0.03
CCDC40-202ENST00000374876 IRF4Q15306 451 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms