RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CALRP27797 417 aaKnown RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 TIA1P31483 386 aaKnown RBP eCLIP13.5□□□□□ -0.25
LDB3-204ENST00000372066 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 CAMK2GQ13555 558 aaPredicted RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 DAG1Q14118 895 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 ARHGAP19Q14CB8 494 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 UGT8Q16880 541 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 PLA2G4EQ3MJ16 856 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 OR4F3Q6IEY1 312 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 LCTLQ6UWM7 567 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 GLRX5Q86SX6 157 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 TMPRSS11BQ86T26 416 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 MMAAQ8IVH4 418 aaKnown RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 DCUN1D3Q8IWE4 304 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 ALDH16A1Q8IZ83 802 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 FAM47BQ8NA70 645 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 RHBDD1Q8TEB9 315 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 NUDT8Q8WV74 236 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 NEIL2Q969S2 332 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 NCLNQ969V3 563 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 RAD51AP1Q96B01 352 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 DGCR14Q96DF8 476 aaKnown RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 PANX1Q96RD7 426 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 MTERF1Q99551 399 aaKnown RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 PCED1AQ9H1Q7 454 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 C6orf106Q9H6K1 298 aaPredicted RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 COMMD3-BMI1R4GMX3 469 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 ADAMTS9Q9P2N4 1935 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 KRT87PA6NCN2 255 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 MAGEB17A8MXT2 336 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 K7ESM1 405 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PGM3O95394 542 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PCNAP12004 261 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 GPX2P18283 190 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ACSL1P33121 698 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PIK3CBP42338 1070 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 AFF3P51826 1226 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 GK3PQ14409 553 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PIP5KL1Q5T9C9 394 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 CPZQ66K79 652 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 R3HCC1LQ7Z5L2 792 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 PATL1Q86TB9 770 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 TRIM74Q86UV6 250 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 LRRTM4Q86VH4 590 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ZNF547Q8IVP9 402 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 LRRC56Q8IYG6 542 aaPredicted RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 ZCCHC7Q8N3Z6 543 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 HUS1BQ8NHY5 278 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 C1orf216Q8TAB5 229 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ZFAND2BQ8WV99 257 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SLC5A11Q8WWX8 675 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TMBIM1Q969X1 311 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TBC1D20Q96BZ9 403 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 INPP5KQ9BT40 448 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 OSBPL10Q9BXB5 764 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 EBPLQ9BY08 206 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 OR52A5Q9H2C5 316 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 CCDC86Q9H6F5 360 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 USE1Q9NZ43 259 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 DMTF1Q9Y222 760 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TRIM64CA6NLI5 447 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 CLIC1O00299 241 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 UPK1AO00322 258 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SCN2BO60939 215 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 LRATO95237 230 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ALBP02768 609 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ANXA4P09525 319 aaPredicted RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 ERGP11308 486 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 NPPBP16860 134 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SERPINB1P30740 379 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ARSFP54793 590 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 WNT3P56703 355 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 CNTN1Q12860 1018 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TEAD4Q15561 434 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TTC33Q6PID6 262 aaPredicted RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 C19orf48Q6RUI8 117 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 NXPE4Q6UWF7 544 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ABRAXAS1Q6UWZ7 409 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 XKR5Q6UX68 686 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 DBX2Q6ZNG2 339 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 USP51Q70EK9 711 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 GPR155Q7Z3F1 870 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 C11orf96Q7Z7L8 435 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SATL1Q86VE3 508 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 AMZ2Q86W34 360 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ZDHHC13Q8IUH4 622 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 C1orf52Q8N6N3 182 aaKnown RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 COQ8BQ96D53 544 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 MTERF3Q96E29 417 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 EGLN2Q96KS0 407 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 CDC6Q99741 560 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms