RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 B4GALT2O60909 372 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 COL6A2P12110 1019 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 ACP5P13686 325 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 SSTR1P30872 391 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 PRR5P85299 388 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 MYLK3Q32MK0 819 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 SDHAF4Q5VUM1 108 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 C9orf57Q5W0N0 161 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 SLC22A25Q6T423 547 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF705AQ6ZN79 300 aaPredicted RBP8.37□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF283Q8N7M2 679 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 OR6N1Q8NGY5 312 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 STAG3L4Q8TBR4 150 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 ACTL9Q8TC94 416 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 HSPA12BQ96MM6 686 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 CD93Q9NPY3 652 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 MEMO1Q9Y316 297 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 ADAM18Q9Y3Q7 739 aa8.37□□□□□ -1.07
SYNE1-206ENST00000367253 H3BNC9 293 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 BHLHE40O14503 412 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 TCAPO15273 167 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 TBX1O43435 398 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PRICKLE3O43900 615 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 LYPLA2O95372 231 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CALCAP01258 141 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 LTA4HP09960 611 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 RARAP10276 462 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF30P17039 623 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PGAM1P18669 254 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A4P22310 534 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 GADD45AP24522 165 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A3P35503 534 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 GRM7Q14831 915 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PDK4Q16654 411 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 KRBOX4Q5JUW0 171 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SPANXN3Q5MJ09 141 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ZFP82Q8N141 532 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 OR5H6Q8NGV6 325 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 KCNN3Q9UGI6 736 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CNOT11Q9UKZ1 510 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PSAT1Q9Y617 370 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 A0A1W2PQH9 124 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 A6NL46 340 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SLC30A4O14863 429 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 AIREO43918 545 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 GNA12Q03113 381 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 LAIR1Q6GTX8 287 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 FAM83HQ6ZRV2 1179 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SATL1Q86VE3 508 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 COMTD1Q86VU5 262 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 FAM109AQ8N4B1 249 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 C12orf76Q8N812 135 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 DNAJA4Q8WW22 397 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ASPNQ9BXN1 380 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 RANBP3Q9H6Z4 567 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 S100A14Q9HCY8 104 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ATP13A2Q9NQ11 1180 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ITM2CQ9NQX7 267 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SPHK2Q9NRA0 654 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CLEC1BQ9P126 229 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 MCTS1Q9ULC4 181 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ARFGEF2Q9Y6D5 1785 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A9O60656 530 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 GATBO75879 557 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CDK1P06493 297 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A6P19224 532 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CFL1P23528 166 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SLC1A2P43004 574 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 OR4D2P58180 307 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 FLI1Q01543 452 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PDE7AQ13946 482 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 NSDHLQ15738 373 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ARCQ7LC44 396 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 KCNMB4Q86W47 210 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 NUDT13Q86X67 352 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SEMA6DQ8NFY4 1073 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 OR5M3Q8NGP4 307 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 OR4Q3Q8NH05 313 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 TRMT10AQ8TBZ6 339 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ACOT11Q8WXI4 607 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 POMKQ9H5K3 350 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A7Q9HAW7 530 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A10Q9HAW8 530 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 UGT1A8Q9HAW9 530 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 SLC2A9Q9NRM0 540 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PRODH2Q9UF12 536 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CD300AQ9UGN4 299 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 ADGRE2Q9UHX3 823 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 MBD1Q9UIS9 605 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 MRPS2Q9Y399 296 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 OR10H3O60404 316 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PTBP3O95758 552 aaKnown RBP8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PIGRP01833 764 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 GALTP07902 379 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 PEPDP12955 493 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 CRATP43155 626 aa8.36□□□□□ -1.07
SYNE1-206ENST00000367253 RIDAP52758 137 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms