RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PELOQ9BRX2 385 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 PIGVQ9NUD9 493 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 NUDT15Q9NV35 164 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM184CQ9NVA4 438 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 FARSAQ9Y285 508 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 NOP16Q9Y3C1 178 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 VILLO15195 856 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 MERTKQ12866 999 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 NKAPLQ5M9Q1 402 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ASPGQ86U10 573 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 S100A16Q96FQ6 103 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 PTCHD1Q96NR3 888 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 TSSK6Q9BXA6 273 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 DERL2Q9GZP9 239 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 MTMR10Q9NXD2 777 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 MLXQ9UH92 298 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SLC22A1O15245 554 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 GNRHRP30968 328 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 OR4D2P58180 307 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 PLEKHS1Q5SXH7 462 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 BBS10Q8TAM1 723 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 MT-ND5P03915 603 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SWT1Q5T5J6 900 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ZNF641Q96N77 438 aaPredicted RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 OR1F2PQ96R84 312 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ITPAQ9BY32 194 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 SLC2A11Q9BYW1 496 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 OR51I1Q9H343 314 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 MOV10Q9HCE1 1003 aaKnown RBP15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM248Q9NWD8 314 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 ADAM18Q9Y3Q7 739 aa15.19■□□□□ 0.02
NUCKS1-201ENST00000367142 FTCDNL1E5RQL4 147 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 PLD2O14939 933 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 CH25HO95992 272 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 HADHBP55084 474 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 GPRC6AQ5T6X5 926 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 SLC39A4Q6P5W5 647 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 USB1Q9BQ65 265 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 SMG9Q9H0W8 520 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 OR51B5Q9H339 312 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 EHD1Q9H4M9 534 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 EME2A4GXA9 379 aaPredicted RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 DNM1LO00429 736 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 CAPN5O15484 640 aaPredicted RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 C6orf47O95873 294 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 SPARCP09486 303 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 S1PR1P21453 382 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 BDH1Q02338 343 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 TUBB3Q13509 450 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 TRAM2Q15035 370 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 DHCR24Q15392 516 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 GLT8D1Q68CQ7 371 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 DAZLQ92904 295 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 LOC100509620A0A075B734 347 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 H2BFMP0C1H6 154 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 LHCGRP22888 699 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 MAGEA11P43364 429 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 ID2Q02363 134 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 CHRFAM7AQ494W8 412 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 ALPK1Q96QP1 1244 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 M0R036 132 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 HNRNPA1P09651 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 PTGIRP43119 386 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 GRK1Q15835 563 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 FAM76BQ5HYJ3 339 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 RAB12Q6IQ22 244 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 RNF111Q6ZNA4 994 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 OR6N2Q8NGY6 317 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 NSMAFQ92636 917 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 KLHL15Q96M94 604 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 CD320Q9NPF0 282 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 TSPAN6O43657 245 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 RNGTTO60942 597 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 PBX1P40424 430 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 CRISP1P54107 249 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 FUT2Q10981 343 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 SLC36A3Q495N2 470 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 TRMT10BQ6PF06 316 aaKnown RBP15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 NCEH1Q6PIU2 408 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 TICAM1Q8IUC6 712 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 SCP2D1Q9UJQ7 156 aa15.18■□□□□ 0.02
NUCKS1-201ENST00000367142 A6NLC8 198 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 HCRTR2O43614 444 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 LRRC57Q8N9N7 239 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 OR5L2Q8NGL0 311 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 C2orf92A0A1B0GVN3 265 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 SCO2O43819 266 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 UNGP13051 313 aaPredicted RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 F8A1P23610 371 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 TMEM115Q12893 351 aaPredicted RBP15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 BLMHQ13867 455 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 RHEBQ15382 184 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 PTCHD3Q3KNS1 767 aa15.17■□□□□ 0.02
NUCKS1-201ENST00000367142 ZNF805Q5CZA5 627 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms