RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ERP27Q96DN0 273 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 SLC45A3Q96JT2 553 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 MAELQ96JY0 434 aaKnown RBP6.7□□□□□ -1.34
VPS13A-201ENST00000355766 RMDN2Q96LZ7 410 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 TMEM237Q96Q45 408 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 SMIM14Q96QK8 99 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 ZNF382Q96SR6 550 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 SYT3Q9BQG1 590 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 TMEM120AQ9BXJ8 343 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 LRMDAQ9H2I8 198 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 RMI1Q9H9A7 625 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 NTMQ9P121 344 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 LNPEPQ9UIQ6 1025 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 VPS4AQ9UN37 437 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 TP53TG5Q9Y2B4 290 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 DNAJC16Q9Y2G8 782 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 EMC9Q9Y3B6 208 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 FADS3Q9Y5Q0 445 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 RNF215Q9Y6U7 377 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 ICE1Q9Y2F5 2266 aa6.7□□□□□ -1.34
VPS13A-201ENST00000355766 LRRK1Q38SD2 2015 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CENPEQ02224 2701 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 PABPN1LA6NDY0 278 aaKnown RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 NEMP1O14524 444 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ZNF195O14628 629 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 HGSO14964 777 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 DUX1O43812 170 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 SNX2O60749 519 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 KATNA1O75449 491 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GPC4O75487 556 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 DNAJC8O75937 253 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 RECQL5O94762 991 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 SLC25A14O95258 325 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 DDAH2O95865 285 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 SOD1P00441 154 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ENO1P06733 434 aaKnown RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 HOXC4P09017 264 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 PRKAR1AP10644 381 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CCL4P13236 92 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GFAPP14136 432 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GM2AP17900 193 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CALB2P22676 271 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 UGT1A3P35503 534 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GGT5P36269 586 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 AQP5P55064 265 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 YPEL5P62699 121 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 B4GALNT1Q00973 533 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 PPARDQ03181 441 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 SGCGQ13326 291 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GTF2H3Q13889 308 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ACOX1Q15067 660 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 OR4D1Q15615 310 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 TSNQ15631 228 aaKnown RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 KIF26BQ2KJY2 2108 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 PHF19Q5T6S3 580 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CES4AQ5XG92 561 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ANKS6Q68DC2 871 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 SULT1C3Q6IMI6 304 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 NAPRTQ6XQN6 538 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ZCCHC23Q6ZST2 131 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 LRRC70Q7Z2Q7 622 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CUZD1Q86UP6 607 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 HEATR4Q86WZ0 1026 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 KLHDC8AQ8IYD2 350 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CPNE9Q8IYJ1 553 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 FITM2Q8N6M3 262 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 FAM169BQ8N8A8 192 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 LINC00482Q8N8I6 264 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 PTGR2Q8N8N7 351 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 SIDT2Q8NBJ9 832 aaKnown RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GPR156Q8NFN8 814 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ACTRT2Q8TDY3 377 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ZNF483Q8TF39 744 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ATL1Q8WXF7 558 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 COX14Q96I36 57 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 RIOK2Q9BVS4 552 aaKnown RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 TRIM54Q9BYV2 358 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ABCG8Q9H221 673 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 DPEP2Q9H4A9 486 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 GSTO2Q9H4Y5 243 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 COG4Q9H9E3 785 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 MEAF6Q9HAF1 191 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 TRIM39Q9HCM9 518 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 TCF7L2Q9NQB0 619 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 AKAP7Q9P0M2 348 aaPredicted RBP6.69□□□□□ -1.34
VPS13A-201ENST00000355766 ZFP69BQ9UJL9 534 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CDYLQ9Y232 598 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 PCDHGA3Q9Y5H0 932 aa6.69□□□□□ -1.34
VPS13A-201ENST00000355766 CELSR2Q9HCU4 2923 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 NPEPPSL1A6NEC2 478 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 IGLON5A6NGN9 336 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 EFCAB7A8K855 629 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CAPN14A8MX76 684 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 SUPT3HB4E1H0 165 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 GFYI3L273 518 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 CHUKO15111 745 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 NKX2-8O15522 239 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 ITM2AO43736 263 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 RAD1O60671 282 aa6.68□□□□□ -1.34
VPS13A-201ENST00000355766 UGDHO60701 494 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms