RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DENND6BQ8NEG7 585 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 HSPA12BQ96MM6 686 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 SDR39U1Q9NRG7 319 aaPredicted RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 GLS2Q9UI32 602 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 MITFO75030 526 aaPredicted RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 RETP07949 1114 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 CRHBPP24387 322 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 CTBP2P56545 445 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 SNAPC3Q92966 411 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 DDX6P26196 483 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMC4-201ENST00000344722 GMPRP36959 345 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 GNALP38405 381 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 SCGB2B2Q4G0G5 96 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 KRTCAP2Q8N6L1 136 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 OR8D1Q8WZ84 308 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 CLIP3Q96DZ5 547 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 ASAH2Q9NR71 780 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 OSER1Q9NX31 292 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 MEIOCA2RUB1 952 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 AGR2O95994 175 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 EPOP01588 193 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 CHRNB1P11230 501 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 FOSL2P15408 326 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 AGXTP21549 392 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 CFL1P23528 166 aaKnown RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 DCTP40126 519 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 CREMQ03060 361 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 BTG3Q14201 252 aaPredicted RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 CDKL4Q5MAI5 379 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 TMEM220Q6QAJ8 160 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 TSPAN33Q86UF1 283 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 THOC6Q86W42 341 aaKnown RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 OR2L3Q8NG85 312 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 ARL6Q9H0F7 186 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
SMC4-201ENST00000344722 ZFR2Q9UPR6 939 aaKnown RBP17.47■□□□□ 0.39
SMC4-201ENST00000344722 GRXCR2A6NFK2 248 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 TOXO94900 526 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 CH25HO95992 272 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 PRKCGP05129 697 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MAP3K8P41279 467 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 E2F1Q01094 437 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 ZNF366Q8N895 744 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 S100PBPQ96BU1 408 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 TTPALQ9BTX7 342 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MMP28Q9H239 520 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MKKSQ9NPJ1 570 aaPredicted RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 ASB4Q9Y574 426 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 C2orf92A0A1B0GVN3 265 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 ANKRD33BA6NCL7 494 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 S1PR4O95977 384 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 TGFB1P01137 390 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MAPK3P27361 379 aaPredicted RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 OXTRP30559 389 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 ATXN7L2Q5T6C5 722 aaPredicted RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 GID4Q8IVV7 300 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 RGL4Q8IZJ4 473 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 NKD1Q969G9 470 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MYOCQ99972 504 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 HEMK1Q9Y5R4 338 aaPredicted RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 C7orf72A4D263 438 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 C6orf47O95873 294 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 PAHP00439 452 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 CASP3P42574 277 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 AFF1P51825 1210 aaKnown RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 MLLT6P55198 1093 aaPredicted RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 STXBP1P61764 594 aaKnown RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 FBXL22Q6P050 247 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 RNF130Q86XS8 419 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 OR2L5Q8NG80 312 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 OR4K3Q96R72 315 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MED31Q9Y3C7 131 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
SMC4-201ENST00000344722 A0A1B0GVI7 797 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 ARL5CA6NH57 179 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 LHCGRP22888 699 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 ITPKBP27987 946 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 CXCR4P61073 352 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 SH3BP2P78314 561 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 SP140Q13342 867 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 FAM46CQ5VWP2 391 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 CACUL1Q86Y37 369 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 IQCF2Q8IXL9 164 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 MROQ9BYG7 248 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 XYLT2Q9H1B5 865 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 PPA2Q9H2U2 334 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 EMCNQ9ULC0 261 aa17.46■□□□□ 0.39
SMC4-201ENST00000344722 NRP1O14786 923 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 PROM1O43490 865 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 MPIP34949 423 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 DEFB128Q7Z7B8 93 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 GALNT11Q8NCW6 608 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 SCP2D1Q9UJQ7 156 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 A0A1W2PQL4 384 aaPredicted RBP17.45■□□□□ 0.38
SMC4-201ENST00000344722 STBD1O95210 358 aa17.45■□□□□ 0.38
SMC4-201ENST00000344722 KLK1P06870 262 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms