RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OPTCQ9UBM4 332 aa14.54□□□□□ -0.08
VAPA-201ENST00000340541 LOC102723996A0A087X1L8 192 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 LRIT2A6NDA9 550 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 CLEC3AO75596 197 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 AGFG2O95081 481 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 RBP1P09455 135 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 COX6A1P12074 109 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 GFAPP14136 432 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 ACPPP15309 386 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 GSTM2P28161 218 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 HNRNPH1P31943 449 aaKnown RBP14.53□□□□□ -0.08
VAPA-201ENST00000340541 HNF4AP41235 474 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 RAB8AP61006 207 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 IRF8Q02556 426 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 Q0VFX4 171 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 INPP5JQ15735 1006 aaPredicted RBP14.53□□□□□ -0.08
VAPA-201ENST00000340541 TSNAXIP1Q2TAA8 658 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 ADPRMQ3LIE5 342 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 TUBB8Q3ZCM7 444 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 TOR1AIP1Q5JTV8 583 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 TMEM205Q6UW68 189 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 ABHD13Q7L211 337 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 KRT78Q8N1N4 520 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 GALNT16Q8N428 558 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 CLEC1AQ8NC01 280 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 TTLQ8NG68 377 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.53□□□□□ -0.08
VAPA-201ENST00000340541 PNPLA2Q96AD5 504 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 VN1R1Q9GZP7 353 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 RHBGQ9H310 441 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 ATP13A2Q9NQ11 1180 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 SLAMF7Q9NQ25 335 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 LANCL2Q9NS86 450 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 GPR83Q9NYM4 423 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 CPSF2Q9P2I0 782 aaKnown RBP14.53□□□□□ -0.08
VAPA-201ENST00000340541 XPR1Q9UBH6 696 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 MKL2Q9ULH7 1088 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 PRRC2CQ9Y520 2896 aaKnown RBP14.53□□□□□ -0.08
VAPA-201ENST00000340541 SCN2AQ99250 2005 aa14.53□□□□□ -0.08
VAPA-201ENST00000340541 OR2W5A6NFC9 320 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 ESPNB1AK53 854 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 CHST10O43529 356 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 SIX3O95343 332 aaPredicted RBP14.52□□□□□ -0.09
VAPA-201ENST00000340541 DDAH2O95865 285 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 SHBGP04278 402 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 HEXBP07686 556 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 EPB42P16452 691 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 VSNL1P62760 191 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 OLR1P78380 273 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 AIMP2Q13155 320 aaKnown RBP14.52□□□□□ -0.09
VAPA-201ENST00000340541 RAPSNQ13702 412 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 MYBPC3Q14896 1274 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 LGSNQ5TDP6 509 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 FAAH2Q6GMR7 532 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 LAS2Q8IYD9 372 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 TEX9Q8N6V9 391 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 SSC4DQ8WTU2 575 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 MS4A6EQ96DS6 147 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 MTBPQ96DY7 904 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 PEX11GQ96HA9 241 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 SLC29A3Q9BZD2 475 aa14.52□□□□□ -0.09
VAPA-201ENST00000340541 ZNF552Q9H707 407 aaPredicted RBP14.52□□□□□ -0.09
VAPA-201ENST00000340541 UTP20O75691 2785 aaKnown RBP14.52□□□□□ -0.09
VAPA-201ENST00000340541 SPTAN1Q13813 2472 aaKnown RBP14.52□□□□□ -0.09
VAPA-201ENST00000340541 SPTBN1Q01082 2364 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 IGHV1-45A0A0A0MS14 117 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 URADA6NGE7 173 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 E2F3O00716 465 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 HPP00738 406 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 CYC1P08574 325 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 UQCRFS1P47985 274 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 RHAGQ02094 409 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 EEF1A2Q05639 463 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 LAPTM5Q13571 262 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 PCOLCEQ15113 449 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 PAGE2BQ5JRK9 111 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 VWA5B1Q5TIE3 1220 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 NIPAL1Q6NVV3 410 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 METTL2BQ6P1Q9 378 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 IGFL3Q6UXB1 125 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 GOLGA7Q7Z5G4 137 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 AMER2Q8N7J2 671 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 PTGR2Q8N8N7 351 aaPredicted RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 GAL3ST3Q96A11 431 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 QRFPRQ96P65 431 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 OR1F2PQ96R84 312 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 MRPL57Q9BQC6 102 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 RBCK1Q9BYM8 510 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 MRPL46Q9H2W6 279 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 CLK4Q9HAZ1 481 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 ZNF160Q9HCG1 818 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 PSMC3IPQ9P2W1 217 aaPredicted RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 PLEKHB1Q9UF11 243 aaPredicted RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 ESPL1Q14674 2120 aa14.51□□□□□ -0.09
VAPA-201ENST00000340541 SPENQ96T58 3664 aaKnown RBP14.51□□□□□ -0.09
VAPA-201ENST00000340541 IQANK1A0A1B0GTG1 560 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 ANKDD1BA6NHY2 528 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 STX16-NPEPL1H3BU86 382 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 STX16O14662 325 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 PCDH17O14917 1159 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms