RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PPM1JQ5JR12 505 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SAXO2Q658L1 398 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF772Q68DY9 489 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 EFCAB12Q6NXP0 572 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RBMS3Q6XE24 437 aaKnown RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CYHR1Q6ZMK1 362 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ADGRD2Q7Z7M1 963 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 B3GNT8Q7Z7M8 397 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SVOPLQ8N434 492 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 C11orf65Q8NCR3 313 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ITFG1Q8TB96 612 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CPNE4Q96A23 557 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SLC22A18Q96BI1 424 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PIWIL1Q96J94 861 aaKnown RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SEPHS2Q99611 448 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SSX3Q99909 188 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CCM2Q9BSQ5 444 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 C16orf70Q9BSU1 422 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CEP41Q9BYV8 373 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 DNTTIP1Q9H147 329 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PIF1Q9H611 641 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RNF167Q9H6Y7 350 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 GORASP2Q9H8Y8 452 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SMURF1Q9HCE7 757 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CCNB1IP1Q9NPC3 277 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 AASSQ9UDR5 926 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SEC14L4Q9UDX3 406 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZDHHC2Q9UIJ5 367 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 BTNL2Q9UIR0 455 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ANKDD1BA6NHY2 528 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 FXYD1O00168 92 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SULT1C2O00338 296 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CLDN4O14493 209 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PDCD5O14737 125 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ADAM12O43184 909 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LALBAP00709 142 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 HNRNPLP14866 589 aaKnown RBP eCLIP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF8P17098 575 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SPI1P17947 270 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PRPH2P23942 346 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RFC3P40938 356 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZFP36L2P47974 494 aaKnown RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LHX1P48742 406 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 DSC2Q02487 901 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SH3PXD2AQ5TCZ1 1133 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ELP2Q6IA86 826 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RGS7BPQ6MZT1 257 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TAPT1Q6NXT6 567 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TMPRSS11AQ6ZMR5 421 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 NUDT18Q6ZVK8 323 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ARMCX2Q7L311 632 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF683Q8IZ20 524 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PLD6Q8N2A8 252 aaKnown RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 UBE2J2Q8N2K1 259 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 BVESQ8NE79 360 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 OR8J3Q8NGG0 315 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 GPR151Q8TDV0 419 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TMEM41AQ96HV5 264 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RTP3Q9BQQ7 232 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF436Q9C0F3 470 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 MINDY3Q9H8M7 445 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SMURF2Q9HAU4 748 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 GALNT9Q9HCQ5 603 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 DMRT1Q9Y5R6 373 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 AGRPO00253 132 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 SEC14L5O43304 696 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 HCN1O60741 890 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 LILRB5O75023 590 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 PGK1P00558 417 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 CD72P21854 359 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 HOXA11P31270 313 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 RORAP35398 523 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 CD79BP40259 229 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 PPP3CCP48454 512 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 AFF1P51825 1210 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 TSPAN5P62079 268 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 MARCH8Q5T0T0 291 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 NOTUMQ6P988 496 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 CES3Q6UWW8 571 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 DPPA2Q7Z7J5 298 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 MCATQ8IVS2 390 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 UMODL1-AS1Q8N2C9 162 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 WDSUB1Q8N9V3 476 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF540Q8NDQ6 660 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 FCGR1BQ92637 280 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 MTFMTQ96DP5 389 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 LRRC46Q96FV0 321 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 RPL10LQ96L21 214 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 CXorf58Q96LI9 332 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 GFM1Q96RP9 751 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 MAP3K3Q99759 626 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 CMSS1Q9BQ75 279 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 TBL1YQ9BQ87 522 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 MRPL45Q9BRJ2 306 aaKnown RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 NKX6-2Q9C056 277 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-201ENST00000316433 PRDM12Q9H4Q4 367 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 CRTAC1Q9NQ79 661 aa6.4□□□□□ -1.38
ZNF540-201ENST00000316433 GTSE1Q9NYZ3 720 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms